Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01828 ATGGATTGTGAGAATGATTGTTCACGGAACATCAATGTAACTGAACTTCCAACAATAACACGGTGGAATCATTCTTCAGCAAATGCTCCTCCTGGTGATCAAGAATCATCACATCCAATCTTTTCGAACAGAGGCATGGATAACAGCAAAATTTCCTCCGGCGGCTGTGGCAGATTTAATGGAGACATTTATTGTTCTTCAATAAATTCTCTTCCCGTTCATGAATCAGATCCAAGTTTCCCAAACAGAGGCACGAACAACATGGATGGATTCAATGGAGCAAGTTATGACCTTCATTCTTTTTCAGCAAATGCTCCTCTTCCTCGTCAAGAATCAGATCCAATTTTCCCAACGGGAGGCATGATGAACAGCAACATGTGTGGCGGCGGCGGATTCAACCGAGCAAGTGACCTTCTCTTGGTGGTGTCAATGTACGCAGAGCCAACAAAGTCAGAAATCATAGCCCTTGCTGAGTCCGCGATGGATGAATTGTCGAAAATAGCCCTGGAAGGGCAGCCTTTGTGGGTCCCACAGAAGGACAAGAAGTTCGAAACGCTTAACGATATCGAGTACTTGAGGCAGTTCGGTGAGGTTCAAGAAATTGAATCGATGAAGGAGATTATGAAGCTTGTTGAGGTTGGACAAGAAGAGTCTTCTTCTTCCCAGTACTTGTTGCCAACCGTTGACTCGTTTCGAAGGGAGCTTGTTCCGTTATCTCTCAGTGGAGTTCCCAAGGAAGCTCTTCAAACTGAAGCTTCACGTGATATGGGGTACCTTGAGATCAGTTCCACCAAACTGCTTCACTTGCTTATGGATGTGAATCAATGGTCCAAAGCATTCGACAATATTGTCACCAGGGCAGCGGTGCTAGGAACCTTATCAAATGGAGCGGAAGAAAGTTATGATGGGAAAGTGCAAGTGATGTTCGCGGAATATCATTTGCCTACACCATTTGTGCCATCAAGGGAGTGCTATTTTGCAAGGTACTGCAAGCAATTACCTTATGAAATGTGGGGTGTTGTTGATGTGTCCCTTGAGAAGCATTTTCCATCTCTAGCAACCAATTTCCGAAGAAGACCATCAGGCTGCTTGATTAGGCCAATGCCAGACGGATTTTCTAAGGTTATATGGGTGGAGCATGTGGAAGCAGACCATAGCCAACTGAGTAACCATTTCCGGCCACTAGTAACAACGGGTTTGGGTTTTGGTGCAACTCGTTGGATTAATTCTATAGTTAAGCACACTGAATCATCTAAAATTATGGAGGCTAAATCAGCTCCAATTTATGTGGATTATGGAGTTATAATACCACAAGCTGGAAGGACAAGTTTCCTTAACCTGGCAGACAGACTTGTGAGAACCTTTTGTGGTGATATCAATGCTTCAATGACGAATCAATGGATGCCATTAATATCTTCAGAATCTGATTCTTCAGATGTGAGGGTGATGATCAGGAATAACATTGAGGATCCTGGGAAACCTATTGCTACAACTGTGGTGTTTAGCACTTGTCTTTGGCTTAAAGTCTCACCATCACGGTTGTTCAATTTCTTGCGTCACGAGGATTCAAGAAACAAGTGGGATATACTTTCACGTAATCTTACAATTCGGGAATTTGCATATATGAACAAAGGCACAAATCCAGGGAATCGTGTTTCTTTAATGCGAGCAATGAAATCTGAAGACAAGATTGAGATCTTTTACATTCAAGAGAGCTACATAGACACAACAGGGTCCTATATTGTTTATGCTCCACTAGACGAATTTGCTTTGTCATCTCTTGCAAATGGAGCAAACCCTAACAAGGTAATGGTCCTTCCATCAGGATTTTCTATCCTTCCTTGTGGGTTCCCTAGTGATTATATTGATGAAAAGGGTGAAGGTGGAAGCATTTTAACTATTGCGTTTCATACAATTGAGAGTCACAACATTAAACAATTTTTTTCTCTTGAATCAGTTATTGTCATGAAAAATATTATTTCAGACACTGTCACCAGTATAAAAGATGCCGTGTTGTATAATAATTACACTAACAATTGGCAGTATAATTGA 2052 0.4176 MDCENDCSRNINVTELPTITRWNHSSANAPPGDQESSHPIFSNRGMDNSKISSGGCGRFNGDIYCSSINSLPVHESDPSFPNRGTNNMDGFNGASYDLHSFSANAPLPRQESDPIFPTGGMMNSNMCGGGGFNRASDLLLVVSMYAEPTKSEIIALAESAMDELSKIALEGQPLWVPQKDKKFETLNDIEYLRQFGEVQEIESMKEIMKLVEVGQEESSSSQYLLPTVDSFRRELVPLSLSGVPKEALQTEASRDMGYLEISSTKLLHLLMDVNQWSKAFDNIVTRAAVLGTLSNGAEESYDGKVQVMFAEYHLPTPFVPSRECYFARYCKQLPYEMWGVVDVSLEKHFPSLATNFRRRPSGCLIRPMPDGFSKVIWVEHVEADHSQLSNHFRPLVTTGLGFGATRWINSIVKHTESSKIMEAKSAPIYVDYGVIIPQAGRTSFLNLADRLVRTFCGDINASMTNQWMPLISSESDSSDVRVMIRNNIEDPGKPIATTVVFSTCLWLKVSPSRLFNFLRHEDSRNKWDILSRNLTIREFAYMNKGTNPGNRVSLMRAMKSEDKIEIFYIQESYIDTTGSYIVYAPLDEFALSSLANGANPNKVMVLPSGFSILPCGFPSDYIDEKGEGGSILTIAFHTIESHNIKQFFSLESVIVMKNIISDTVTSIKDAVLYNNYTNNWQYN 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01828 683 Gene3D - 245 411 IPR023393 -
Adu08g01828 683 SUPERFAMILY Bet v1-like 439 638 - -
Adu08g01828 683 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 133 673 - -
Adu08g01828 683 SUPERFAMILY Bet v1-like 252 416 - -
Adu08g01828 683 Pfam START domain 240 416 IPR002913 GO:0008289
Adu08g01828 683 CDD START_ArGLABRA2_like 150 416 - -
Adu08g01828 683 MobiDBLite consensus disorder prediction 22 46 - -
Adu08g01828 683 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 133 673 IPR042160 -
Adu08g01828 683 ProSiteProfiles START domain profile. 146 420 IPR002913 GO:0008289
Adu08g01828 683 SMART START_1 198 417 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01828 Adu-Chr8 30105044 30109241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01828 135 671 Homeobox Transcription Factor Family AT4G21750 38.256 1.50e-119 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01828 K09338 - jre:108992281 504.212