Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01812 ATGGACTCAGGTGATGAGACGGCAAGAACTTCTGCTTATGCGAGTTGGTCATGGACCCGGTTGTGCTTTTTCATATCAGGTATCTTTTTTGGTTCATTCGTATCAGGCATGTTACTCCGTTGGAAAAAACCCTTGCTGAGCAGCAACTTCCGGGCTCTACTGGGTTACCAAGATTCGGATTCCGACAACATCCAAGATGAGGCGTCGGGCGAGGAAGATTCAGCTTCTCTTCATTCTCTGGATTCAAATATCATCCAAGGCAGCTCCCTGCGCCAGCAGGAAGATTCAGCTTGGGATCATCCTCCACCGGAGTCAAAGGAAAAGGGCGAAGGGATTGAAAGAATTGTAGAGAAGGTGTCGGGCATACTGGTTTATAAATTCCAAAAGATAAGGTTTAGTGATAAACATCCAGAATCCACTGAAAGAAGACCATCATTGAAGGAAGTCAACAAATATGACGTGTTTCTAAGTCTCAGACACACTCACTCCACATTTATTTACTATCTTTACCATTATCTCACCAAGAAAGGATTTTCCACCTTCAAGAGTGATGAGGAGATTCAGAAAGGAGAATCCATTCCGTCTCAGGTCCTCCAAGCAATTAAAGATTCGCGAATTATTATAGTTGTGTTCACAAGAGATTATGCTGATTCAACAAGTTCTTTGGAGGAAATGACTACCATAGTTGAGTGTTGCCGGGAACTAGAACAAACTATCATCCCAGTTTTCTTTGATGTGGATCCCTGGGATGTTCGACTAACACAAATTGGCCCTTACAAGAAAGCCTTTGTTTCGCATACGGAGAAATTCAAACAAGATCCTCTCAAGATTCAAAAGTGGAAGGAAGCTTTAACACATGTGAGCAATATAAATGGTGTGCATATAAAACATGAGCCAGAGATTGAAGTGATTGGAAAGATCGTTCAGGCAGTGGAACTACGACTGAGGCTTACTAGTCATAATCTAGAGAAGCTTTTGAATTTAGAGGACAACCGTGTTTTAGTTCTTGGAATTTGGGGCATGGGTGGATCTGGAAAGACAACTCGTGCTTTAGCTTTGTATAAAAGAATCTTTCAGCAATTTGAGGCTGCTTGTTTTATTAAGGACTTAAGCCAGGTTTACGGAATTGGTGGTGCTACTGCTGTGGAGAAAGAAATCCTCCGTGAAACATTAAATGAAGAACTTCCAGATGTGTACAGTCCTTTCGAAATATCTGGCTTGGTAAGGAAAAGGCTATCTTGGAAACGGATACTTATAGTCTTTGACAATGTTGATGAACTAATGCAATTGAAGGAATTGGCTATAAATCGTCTAATGCTTGGGATGGGAAGTAGGATTATCATAACCACTAGGAATAGGCGAATTTTGGATGCATACGAAGTAGATGAAATTTACGAGATTCCATTATTGAATGAGGATGAAGCTCGTGAACTGTTCCTGAGTGCTTGTCCTGGTGTTACCAATTATGATTACTATACTGAGTTGATTGCAAGAGTACTAGAATATGCTGGTGGTCTTCCGTTGGCAATCAAAGAACTGGCTTCTATTTTGCAAGTCCGTTGTGAATTCTTCTTGCAAGACTTAAATAAATCCTTCTGGCAACATACCTTGAATAGATTGAGAACAAGGCCAATTGTTGAAATTATGAAGCCTCTTAAAACAAGTTTTGAGAGTTTAGACGAAGATGAGAAAGAAATCTTTTTGCACATTGCTTGTTTCTTTCATGGGAAGAGGGGGGATTATGTAATCCAAGTTCTAAATTCTTGTGGATTTTTTGCTGAAATTGGGATTCAAGCTTTGTTGGACAAATCACTCATCACCATACAAAATCAGGAAATTCATATGCACGACATGTTGCAAGATTTGGGAAAGAAAATTGTCCGTGAAGAATGTGCAGAAAATCCACCACTGCGTAGTAGATTGTGGCTTTACGAGGACTTCAACATTGCCTTGAGGTCAAAAATGGAGCGAAACAAAGTTAAAGCCATAGTTCTATATGAGGGTACCTCTACCTCCAAACATGAATATTTGAACATTGAAAGATTGTCGAAAATGAGAAATCTTGTGCTGCTCATATTATATGGTCAGCACTTTTCGGGAATTCCAACTTCTCTTCCCCACAGATTACGGTATCTTTTGTGGGACGGATATCCATTCTCTTCTTTGCCTTCATTTGAACCGTATAACCGTCTTGTTGAATTGAATTTGCCCAACAGCCGCATCAAACGGTTATGGAATGGCCGCAAGAACTTTCCACGTTTGGAAAGGGTGGATATGAGTTACTCAGAAGAGCTCACGGAGACGCCAAATTTTGAAGGGTGCCCAAGTCTTAAGCGGCTAGATCTCACAGGATGCACAAACCTAGTGCAAGTCCATCCATCTATCGGACATCTTAAAGAACTTGCTTACTTGAGTTTCCGTGACTGTGATAAGTTGGTCACCCTCAATCTTGATCATAAATGCAAATTAAGTTCTTTGAAGGTTCTTGACCTCTATAGTTGCAAAAATCTTAAGAACACAGATTTTACAGGATTACCCAATCTAGAGCACATTGATCTTGGAGAATGTACAAGTTTATCCACTGTTGATGATTTATTGGGACTCTGGCAGGAGCTATATCCTCTTCAAATGGCTCAGCAGAAGGTTGTGTTAAAGGTTTTGACTATGACTGATGATAAAACAGTGCAGAAAGCTATCAAAGCAGTTGCAGATATATTTGGAGTTGAGGCAATAGCAGTAGATAGAAAGGAGCAGAAGCTAATAGTGATTGGAAAAATGCCCACATTGGCAATTGTGAAGAAGCTCAAAAAATTTGGCAAGGTTGATATCATATCTGTTGGACCTGTAAAAGAAGTGAAGAAGGAGGAGAAGAAGGAAGAAAAGAAAGAGGAGAAGAAGAAAAAGGAAGAGGCGGAGGAGGAAAAAAATTGCCGCTATATACACAAATTTCAATCTTCCGCCAGagatgatgatgttgagGGCGAAGGGGGAGGTGATCCGCCAGCCGATCAAACATGTGTTGCTACCTCTGATGGAACGAACCAACAAGGTGAAGGAAGAAATGTACAACCTACTGATGTAGCACCTATTGCTTCAGCAGCCAGTGATGTGCAACCAGTCGAACTTGATTTGTCTCAACCTACCTGCTTTGAACAAGATGACTCTCAGCAGGTAAAGATGTAA 3183 0.4053 MDSGDETARTSAYASWSWTRLCFFISGIFFGSFVSGMLLRWKKPLLSSNFRALLGYQDSDSDNIQDEASGEEDSASLHSLDSNIIQGSSLRQQEDSAWDHPPPESKEKGEGIERIVEKVSGILVYKFQKIRFSDKHPESTERRPSLKEVNKYDVFLSLRHTHSTFIYYLYHYLTKKGFSTFKSDEEIQKGESIPSQVLQAIKDSRIIIVVFTRDYADSTSSLEEMTTIVECCRELEQTIIPVFFDVDPWDVRLTQIGPYKKAFVSHTEKFKQDPLKIQKWKEALTHVSNINGVHIKHEPEIEVIGKIVQAVELRLRLTSHNLEKLLNLEDNRVLVLGIWGMGGSGKTTRALALYKRIFQQFEAACFIKDLSQVYGIGGATAVEKEILRETLNEELPDVYSPFEISGLVRKRLSWKRILIVFDNVDELMQLKELAINRLMLGMGSRIIITTRNRRILDAYEVDEIYEIPLLNEDEARELFLSACPGVTNYDYYTELIARVLEYAGGLPLAIKELASILQVRCEFFLQDLNKSFWQHTLNRLRTRPIVEIMKPLKTSFESLDEDEKEIFLHIACFFHGKRGDYVIQVLNSCGFFAEIGIQALLDKSLITIQNQEIHMHDMLQDLGKKIVREECAENPPLRSRLWLYEDFNIALRSKMERNKVKAIVLYEGTSTSKHEYLNIERLSKMRNLVLLILYGQHFSGIPTSLPHRLRYLLWDGYPFSSLPSFEPYNRLVELNLPNSRIKRLWNGRKNFPRLERVDMSYSEELTETPNFEGCPSLKRLDLTGCTNLVQVHPSIGHLKELAYLSFRDCDKLVTLNLDHKCKLSSLKVLDLYSCKNLKNTDFTGLPNLEHIDLGECTSLSTVDDLLGLWQELYPLQMAQQKVVLKVLTMTDDKTVQKAIKAVADIFGVEAIAVDRKEQKLIVIGKMPTLAIVKKLKKFGKVDIISVGPVKEVKKEEKKEEKKEEKKKKEEAEEEKNCRYIHKFQSSARDDDVEGEGGGDPPADQTCVATSDGTNQQGEGRNVQPTDVAPIASAASDVQPVELDLSQPTCFEQDDSQQVKM 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01812 1060 Pfam TIR domain 151 321 IPR000157 GO:0007165
Adu08g01812 1060 MobiDBLite consensus disorder prediction 97 111 - -
Adu08g01812 1060 Gene3D - 319 464 IPR027417 -
Adu08g01812 1060 Gene3D Ribonuclease Inhibitor 670 839 IPR032675 -
Adu08g01812 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 160 843 IPR044974 GO:0006952
Adu08g01812 1060 MobiDBLite consensus disorder prediction 91 111 - -
Adu08g01812 1060 ProSiteProfiles TIR domain profile. 150 315 IPR000157 GO:0007165
Adu08g01812 1060 MobiDBLite consensus disorder prediction 953 1060 - -
Adu08g01812 1060 SUPERFAMILY L domain-like 615 870 - -
Adu08g01812 1060 MobiDBLite consensus disorder prediction 1006 1022 - -
Adu08g01812 1060 Gene3D - 149 318 IPR035897 -
Adu08g01812 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 570 IPR027417 -
Adu08g01812 1060 Pfam NB-ARC domain 323 558 IPR002182 GO:0043531
Adu08g01812 1060 Coils Coil 949 978 - -
Adu08g01812 1060 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 160 843 - -
Adu08g01812 1060 MobiDBLite consensus disorder prediction 953 995 - -
Adu08g01812 1060 SMART till_3 151 290 IPR000157 GO:0007165
Adu08g01812 1060 SUPERFAMILY HMA, heavy metal-associated domain 879 940 IPR036163 GO:0046872
Adu08g01812 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 151 292 IPR035897 -
Adu08g01812 1060 Gene3D - 876 952 - -
Adu08g01812 1060 Gene3D - 469 560 IPR042197 -
Adu08g01812 1060 PRINTS Disease resistance protein signature 503 517 - -
Adu08g01812 1060 PRINTS Disease resistance protein signature 335 350 - -
Adu08g01812 1060 PRINTS Disease resistance protein signature 821 837 - -
Adu08g01812 1060 PRINTS Disease resistance protein signature 411 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01812 Adu-Chr8 29893789 29899763 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01812 144 854 WRKY Transcription Factor Family AT4G12020 30.291 3.29e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01812 - - adu:107462276 1274.61