LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g01807	ATGAGCTCAAAATATTCAGGTGACAAAGCTTCGGATTTGGACAGCTGGTTCTGGTTAGTTGCCGGTCTGATAGCAGGCATGATTTTGAGTCCGTTAATATCAAGCTGCTTACCCACTTGGAAATCCTCACTCAAGAGCATGTTTGAGACTCTGCTGGATCAGCTGGGCCATCGAGAAAGACCTTCAAGCATGGTCAACGATTCAGCTTCCGCTCATTTTCTGGATTCAAACATCAGAGAAAGCGTCTGCCCGATCGAGGACAAAGATTCATCTTCCTATCATTCTGCGGATTCAAACATGAGCCAAGTCAGTGCCCTGAGCGACGACGAAGATTCATCTTCCTATCATTCGCAGaaacaaattgttgtcccagttttctgcggcattacttcttctgatgtTGGAAGACGAGGAGGCCCATACGATGTCCACTTCAATTCAGAGCAATACAGCAAAATTCCCAATAGGGTTGACCGATGGAAGTTTGATGCCAAATATTTAGCCAAAGTGTATGGTTTCCCTATAAACCCTGAGAGACCAGAGACTAAACAGCTGGAAGAGATTATTGCTTTTGTTACAAAGGAATTGAATCATAAATTCACAATAGACATCAGTGATCTGATTGGGATACAGCCCCGTGTGGCAGATCTAGAAAGACGACTCAAGTTGACATCAGAGGATGTTCCCTTTCAAATTCTCGAAATTTTGGGCATGAGCGGGATAGGAAAGACAGTTCTTGCTAAGATCTTGTTCGACAGAATCTCTTATCAATTTGATGCTTGCTGTTTTATTCAGGACGTCAACCACATTCATAAAACGCATGGCAGAGGGGCTACTACTAAGATTCAAAAACAGATTATTCATCAGCTTTTCCAGGAAGAAGATCTACAATTTCTAAGTTCTCCTGAAATAGTCAAGATGCTACAAGATAGGTTATGTAACCCAAATCTCCCCAAAAGGGCTCTTATAGTTCTTGACGATGTGGATGATCCAAACCAATGGCATGAATTGCGAATATTGCCTAACTTTCTTGGTGCAGGAAGCAGAGTTGTCATAACTACTAGATTTGAGCATATTCTTAATGTGAATACTACAGCATATGAAATTTACGAGGCTCCACTGTTGAATGATGATGATGCACTGAAACTCTTTCTAACAAAAGTCTCCAAGAGTGACTATCCTAGCACTACTGTCAGCGGTGTATCTCATAAGATAATAGAATATGCTCAACGCCTTCCTTCAGCAATTGAAAACCTGGCTTCCTCCTTCCATCCAATGGGTGAAGAGCTCTGGGAAAGAGAATTGGTGAAATGGAGAAAATATCCGAATGAAAAGTTTATGAAGTCTCTTCAGGAAACAAGTTATGACGAACTGAATAGAGATGAGAAGGTGATATTTCTAGATATAGCCTGTTTCTTTGGGGGAAAAAGGAAGAAATATGTGGAGCACATTTTGGGGACTAAAATGTCAGATCCCTACCTTGCGATTCAAGAGATTCGGAGGAAATCACTCATAACAATTAGGAACCATGAAATTCATATGCATCAAATGTTACGAGAATTGGGAAAGAACATTGTTCGGGACAAATATCCAGAAGAGCCAAAATATTGGTCTAGATTGTGGGATGTTGAGGATTTCCAAAAAGTCTTGATGTCCGATATGAAAGCAAACAAAGTTCAAACCATAGTTTTGGATGATGATGTCTCCAAACACGAGGACATGAAGATTGAAGGATTATCAAATATGAGGGATCTTAGACTGCTTATATTACATCATAAGAGCTCCTCAGAAAACCTCACTTTTCGTTTCAATGAGCTATACTATCTTTTATGGCATGGTTACTCTTTCACTTCTCTCTCACTATCCATATGGTATAATCTTGTTGAATTAAATCTAATTAATAGCAGAATCCAACAACTATGGGAAGGCAGCCAGGCAATTCCAAATCTAAAAATGGTGGATTTGAGCAACTCGAAAAATCTTAAAGAGATGCCAAGTTTTGAAGGTTGCCGAGGACTTGTGAGACTAGATCTTTCAGGATGCACAAACCTAACGAAAGTGCATGAATCAATTGGGCTTCTTAAAGAACTTGATTGTTTGAGTTTGCAAGACTGTACCAGTCTAGCCCTTCTTGATTTTGGCACTAATTGTCAGTTACGTTCTCTGAGAACTCTACTTCTCTCTGGCTGCACCAAGCTCGAGCACACGCCAGATTTGTCTGGGCTTTCAAATCTTAGGTACCTGGATCTTGAGCGATGTACAAATTTGTCCACAGTTCATAGGTCTATTGGGGAGCACGCAACACTCAAGTACTTGAGTCTGAGAGGCTGCATAAATCTTGTTCATCCACCTGACATTGTCAATGGCAACTCATCCCTCCTAATTCTAGATTTGAGCGGTTGCATGAGGATAACCAACCTTCTCTGCCGCAGACGAAAATTTGCACCTTCCTCCTGCCTGGAATCTTTGATATTTCTGAGTTCTGACTTCCTTGAGCCAACAAGAACTCTTGATTTTGTTGCAAAGATGAGGTGTTTAGAAAGACCAAACCCGAAGAAACAGGGTTTCGGTTCTGTATTTGACAGGGACTGGCTTTGTTCTAAGCTGACATATTTAAACCTGGCATACTGTCATGAGCTTAGAAGATTTCCTGAGCTATCATTTCATGGCCTTCATGAGATGAAAGGAACTTTAGAACGGTATCCACAACTCTCCATCATAGGTCAGGATTATATATTTTCAGCTTCTACTGTATGA	2757	0.4012	MSSKYSGDKASDLDSWFWLVAGLIAGMILSPLISSCLPTWKSSLKSMFETLLDQLGHRERPSSMVNDSASAHFLDSNIRESVCPIEDKDSSSYHSADSNMSQVSALSDDEDSSSYHSQKQIVVPVFCGITSSDVGRRGGPYDVHFNSEQYSKIPNRVDRWKFDAKYLAKVYGFPINPERPETKQLEEIIAFVTKELNHKFTIDISDLIGIQPRVADLERRLKLTSEDVPFQILEILGMSGIGKTVLAKILFDRISYQFDACCFIQDVNHIHKTHGRGATTKIQKQIIHQLFQEEDLQFLSSPEIVKMLQDRLCNPNLPKRALIVLDDVDDPNQWHELRILPNFLGAGSRVVITTRFEHILNVNTTAYEIYEAPLLNDDDALKLFLTKVSKSDYPSTTVSGVSHKIIEYAQRLPSAIENLASSFHPMGEELWERELVKWRKYPNEKFMKSLQETSYDELNRDEKVIFLDIACFFGGKRKKYVEHILGTKMSDPYLAIQEIRRKSLITIRNHEIHMHQMLRELGKNIVRDKYPEEPKYWSRLWDVEDFQKVLMSDMKANKVQTIVLDDDVSKHEDMKIEGLSNMRDLRLLILHHKSSSENLTFRFNELYYLLWHGYSFTSLSLSIWYNLVELNLINSRIQQLWEGSQAIPNLKMVDLSNSKNLKEMPSFEGCRGLVRLDLSGCTNLTKVHESIGLLKELDCLSLQDCTSLALLDFGTNCQLRSLRTLLLSGCTKLEHTPDLSGLSNLRYLDLERCTNLSTVHRSIGEHATLKYLSLRGCINLVHPPDIVNGNSSLLILDLSGCMRITNLLCRRRKFAPSSCLESLIFLSSDFLEPTRTLDFVAKMRCLERPNPKKQGFGSVFDRDWLCSKLTYLNLAYCHELRRFPELSFHGLHEMKGTLERYPQLSIIGQDYIFSASTV	918

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g01807	918	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	736	780	-	-
	Adu08g01807	918	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	120	734	-	-
	Adu08g01807	918	Gene3D	-	103	198	IPR035897	-
	Adu08g01807	918	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	120	734	IPR044974	GO:0006952
	Adu08g01807	918	MobiDBLite	consensus disorder prediction	87	112	-	-
	Adu08g01807	918	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	195	469	IPR027417	-
	Adu08g01807	918	Gene3D	-	375	464	IPR042197	-
	Adu08g01807	918	Gene3D	-	199	370	IPR027417	-
	Adu08g01807	918	PRINTS	Disease resistance protein signature	232	247	-	-
	Adu08g01807	918	PRINTS	Disease resistance protein signature	315	329	-	-
	Adu08g01807	918	PRINTS	Disease resistance protein signature	409	423	-	-
	Adu08g01807	918	PRINTS	Disease resistance protein signature	740	756	-	-
	Adu08g01807	918	MobiDBLite	consensus disorder prediction	94	112	-	-
	Adu08g01807	918	SUPERFAMILY	"Winged helix" DNA-binding domain	452	550	IPR036390	-
	Adu08g01807	918	Gene3D	Ribonuclease Inhibitor	715	905	IPR032675	-
	Adu08g01807	918	Gene3D	Ribonuclease Inhibitor	567	714	IPR032675	-
	Adu08g01807	918	Pfam	NB-ARC domain	223	423	IPR002182	GO:0043531
	Adu08g01807	918	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	736	780	IPR044974	GO:0006952
	Adu08g01807	918	SUPERFAMILY	L domain-like	563	892	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g01807	Adu-Chr8	29805773	29809421	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu08g01807	208	807	WRKY Transcription Factor Family	AT5G45050	29.924	7.73e-56	208

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g01807	-		-	aip:107614139	1563.13