Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01804 ATGGAGACGCCAAATTTTGAAGGGAGCCCAAGTCTTAAGCGGCTAGATTTCACAGGATGCACAAATCTAGTGCGAGTGGATTCATCTATTGGACTTCTTAAAGAACTTGCTTACTTGAGTTTCCGTAACTGTTGTAGATTGGTCATCCTCGATCTTGATGTTGGATGTAACTACGATTGCAAAAAACCGGAAACCAAGCCAGATTTTACAGGAGTAGGACTACCGAATCTTGAGCACCTTGATCTCGGAGAATGTACAAGTTTATCCACTGTTCATTATTCTATTGGGACTCTTAAGCTTAAGTTCTTAAATTTGCAAGGCTGCATAAATCTTGTTGAAAAACCTGATTTCAGTGTGTTTCTAAGAGATGAGCCAGAGAATGAAGTGATTGACCATAGTCAAGTTGGGATACGATCCAATTTAGCCGTGCAAGAAAATCCAGGATCGTCTCAAAGATTGAGCCAGGAATATTCAGCTTCCGATCATGCTCCTCAGAAGTCAAAGGCAGAAACAGAAGCCGAAGGGATTGAAAGAATAGTTGAGGCGGTGTGGGACACGCTGGTTTATAAATTCCAAATTTCAAGGCCAGAGATTGAAGCGATTGGAAATATCATTCAGACAGTGGAACGATTATGCCCTAAATTCTCGAGGCTTAGTAGCGACAGTCCAGTTGGTATACAATCCAGTTTAGCCGTGCTAGAAAAGCTTTTGAAATTAGAGGATGATTGTGTTTTAGTGCTCGGAGTTTGGGGCATGGGTGGATCTGGAAAGACAACCCATGCTTTAGCTTTGTATGACAGAATCGTTCAGGAATTTGAGGGTGCTTGTTTTATTGAGGGCGAAGCAAGCAAAGTTAAAGCCATAGTTCTATATGAGGATACCTCCATCTCCAAACATGAAGATCTGAACATCGAAGGATTGTCAAAAATGACAAATCTTGAACTGCTCATATTATATAATCAGCATTTTTCGGGAAAGCTTACTTCTCTTCCCAACAAATTACGGTATCTTTTGTGGGACGGATATCCTTTCTCTTCTTTGCCTTCATTTGAACCATATAACCGTCTTGTTCAATTGAATTTGCCTAACAGCCGCATCAAACGGCTATGGAATGGCAGTCAGGTATTTCGAAGTTTGGAAAGGGTGGATTTGAGTTACTCAAAATTCCTCAGGGAGACACCAAATTTTGAAGGGAGCCCAAGACTTAAGCGTCTAGATTTCACAGGATGCAGAGAGCTAATGGAAGTCCATCCATCTATCGGACATCTTAAAGAACTTGCTTACCTGAGTTTCCGTGACTGTTATATGTTGGTCACCCTCAATCTTGATCATAAATGCAAATTAAGTTCTTTGAAGGTTCTTGACCTCTATAGTTGCAGACATCTTAAGAAAACACCAGATTTTACAGGAATACCCAATCTTGAGCACATTGATCTTGGAAAATGTGAAGGTTTATCCACTGTTCATCATTCTATTGGGAATCTTGAAAAGCTTAAGTTCTTAAATGTGCCAGCCGACATAGATCTTCCTGAAATAGTTGAGAAATTTGAAGAGGAAGAGCTTAATGAGTATCTGATGGCGGAACTTGGGATTCAATAG 1599 0.404 METPNFEGSPSLKRLDFTGCTNLVRVDSSIGLLKELAYLSFRNCCRLVILDLDVGCNYDCKKPETKPDFTGVGLPNLEHLDLGECTSLSTVHYSIGTLKLKFLNLQGCINLVEKPDFSVFLRDEPENEVIDHSQVGIRSNLAVQENPGSSQRLSQEYSASDHAPQKSKAETEAEGIERIVEAVWDTLVYKFQISRPEIEAIGNIIQTVERLCPKFSRLSSDSPVGIQSSLAVLEKLLKLEDDCVLVLGVWGMGGSGKTTHALALYDRIVQEFEGACFIEGEASKVKAIVLYEDTSISKHEDLNIEGLSKMTNLELLILYNQHFSGKLTSLPNKLRYLLWDGYPFSSLPSFEPYNRLVQLNLPNSRIKRLWNGSQVFRSLERVDLSYSKFLRETPNFEGSPRLKRLDFTGCRELMEVHPSIGHLKELAYLSFRDCYMLVTLNLDHKCKLSSLKVLDLYSCRHLKKTPDFTGIPNLEHIDLGKCEGLSTVHHSIGNLEKLKFLNVPADIDLPEIVEKFEEEELNEYLMAELGIQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01804 532 Gene3D - 224 328 IPR027417 -
Adu08g01804 532 PANTHER TMV RESISTANCE PROTEIN N-LIKE 298 462 - -
Adu08g01804 532 PRINTS Disease resistance protein signature 246 261 - -
Adu08g01804 532 PRINTS Disease resistance protein signature 469 485 - -
Adu08g01804 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 281 IPR027417 -
Adu08g01804 532 Gene3D Ribonuclease Inhibitor 2 122 IPR032675 -
Adu08g01804 532 SUPERFAMILY L domain-like 4 503 - -
Adu08g01804 532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 298 462 IPR044974 GO:0006952
Adu08g01804 532 PANTHER TMV RESISTANCE PROTEIN N-LIKE 66 113 - -
Adu08g01804 532 PANTHER TMV RESISTANCE PROTEIN N-LIKE 2 50 - -
Adu08g01804 532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 171 284 IPR044974 GO:0006952
Adu08g01804 532 MobiDBLite consensus disorder prediction 149 172 - -
Adu08g01804 532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 460 511 IPR044974 GO:0006952
Adu08g01804 532 PANTHER TMV RESISTANCE PROTEIN N-LIKE 460 511 - -
Adu08g01804 532 Gene3D Ribonuclease Inhibitor 329 509 IPR032675 -
Adu08g01804 532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 113 IPR044974 GO:0006952
Adu08g01804 532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 50 IPR044974 GO:0006952
Adu08g01804 532 PANTHER TMV RESISTANCE PROTEIN N-LIKE 171 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01804 Adu-Chr8 29738311 29743347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01804 301 522 WRKY Transcription Factor Family AT4G12020 36.214 8.69e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01804 - - adu:107462388 470.7