Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01801 ATGTACCGTAGAATCAACACCCGACCATTATACGTGGCTGACATAGAGGACCAGGAGAACGAGCCCGAGCCCGCATCAGAAGCCGGGCCTGCTTCTCCTTCCTCAGGTGATGACACAAAATTTGAAGCACCATCACCTAAGAAAAGGAGGGAGATGAAGAAGAGAGTGGTCACAATACCGATCGGTGACGTGGACGGATCTAAGAGCAAAGGAGAATCATATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCACCTTACCCAAGAGGATATTACCGATGCAGCAGCTCAAAAGGGTGCCCGGCGAGGAAGCAAGTTGAACGAAGCCGTGTGGATCCCACAAAGCTCATCGTCACCTACAACTACGAACACAACCACTCTCTTCCGGTAACCAAATCCCACTCCTCCTCCTCTTCCTCCTCTTCCGCCACCATTAACGCCACCGCTACCGCCGTCACCGAAGTCGCTGTGGCCACCTCTCCCTCCGAGTCCGCCGCTGGCTTCCCGCCGGAGGATCTGACGGTATTCTCGAGCCACGTCGATCTCGACCTCTCCGGCGACTCCGCAGTACTTCTCAGCCACCACAACCACCACGGATTCGGGTGGTTCGACGACGTGGCCTCCGCCGGCGGCGTCCTGGAGAGTCCGATCTGCGGCGGCGTTGATGACATGGCGCTGACGGCGGAGGAAGAGGACGGGGAAGAGTCGCTTTTCGCCGGCCTCGGCGAGCTGCCGGAGTGCTCGGCTGTTTTCCGGAGGAGGAATATTCCAAGCGCCAGCGCGATCCAGTGCGGTGGCATCAGAGGATAA 834 0.5827 MYRRINTRPLYVADIEDQENEPEPASEAGPASPSSGDDTKFEAPSPKKRREMKKRVVTIPIGDVDGSKSKGESYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYNYEHNHSLPVTKSHSSSSSSSSATINATATAVTEVAVATSPSESAAGFPPEDLTVFSSHVDLDLSGDSAVLLSHHNHHGFGWFDDVASAGGVLESPICGGVDDMALTAEEEDGEESLFAGLGELPECSAVFRRRNIPSASAIQCGGIRG 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01801 277 PANTHER OS01G0750100 PROTEIN 21 272 - -
Adu08g01801 277 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 272 IPR044810 GO:0003700
Adu08g01801 277 SUPERFAMILY WRKY DNA-binding domain 72 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu08g01801 277 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu08g01801 277 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu08g01801 277 Gene3D WRKY domain 64 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu08g01801 277 MobiDBLite consensus disorder prediction 1 87 - -
Adu08g01801 277 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01801 Adu-Chr8 29721679 29724675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01801 16 264 WRKY Transcription Factor Family AT3G58710 48.400 3.83e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu08g01801 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01801 - - ahf:112707218 499.59