Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01792 ATGATTGTTGAGTTATTGTTGTTGTTTTATGCAGATAATGCTGGGACAAACAAAGCTGCATCTAGTAGCACGTCATTGAACACCAAGAGGCTTGATGATGATACAGAGAATCTTGCTCATGAACGTGTGCCGACTGAACTCAAGAAGGCTCTCATGCAAGCAAGGATGGACAAGAAACTCACTCAAGCACAGCTTGCTCAGATTATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGAAAAGCAATTCCAAACCAGCAGATAATTGGCAAGTTGGAGAGGGCCCTTGGTGCCAAACTGCGAGGCAAGAAATAA 321 0.4424 MIVELLLLFYADNAGTNKAASSSTSLNTKRLDDDTENLAHERVPTELKKALMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01792 106 SMART mbf_short4 50 105 IPR001387 -
Adu08g01792 106 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 12 106 - -
Adu08g01792 106 SUPERFAMILY lambda repressor-like DNA-binding domains 45 102 IPR010982 GO:0003677
Adu08g01792 106 CDD HTH_XRE 49 99 IPR001387 -
Adu08g01792 106 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 12 106 - -
Adu08g01792 106 Pfam Helix-turn-helix 51 101 IPR001387 -
Adu08g01792 106 Gene3D - 35 106 IPR010982 GO:0003677
Adu08g01792 106 MobiDBLite consensus disorder prediction 17 38 - -
Adu08g01792 106 Pfam Multiprotein bridging factor 1 13 43 IPR013729 -
Adu08g01792 106 ProSiteProfiles Cro/C1-type HTH domain profile. 51 105 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01792 Adu-Chr8 29550196 29551670 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Adu08g01792 HTH_3 3.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01792 K03627 - gmx:100500420 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01792 08 29550196 29551670 Adu08g01792 08 29550196 29551670 ECH