Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01789 ATGGGTGAGAGAATTAGTGAAGGCAAAGAAGGGTCTTGTTGTCTAATTACTAGTCCTAATAATGGGAGTAGAAAACGTTCATTCATAGACTTGAATGAAGAAGCTGGTGATGATGAGAACAGAAGCAATAAGAATGATAATGAGATATGTTCATCTTCATGGCAAGAAGGGAATTTGAGTAGCAGCAACAACAACAACGCCACATCATCAAGCGAAGAAGAAGAAGAAGAAGAAGAAGATGATAAGAATAATAATAAAGGAAGAAGAACAAGTATGGTTAGACAATATGTGAGGTCAAAGATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCAAGCTGTTAATCGCCTTGGTGGACAAGAAAGAGCAACACCAAAGTTGGTTCTTCAGTTGATGAATGTGAGAGGTCTTAGCATTGCACATGTAAAGAGTCATTTGCAGATGTATCGAAGTAAGAAGCTTGATGAGTCTGGTCAAGTTTTATCCCAAAGTAGGGCAATGCAACAAGGAAGGCATCAAATTTTGGAGATGTACCAAAGATTAAATGTACAAGCACACTTTGGGGTTGATAACATTATTAACAGGAGTAGTAGTTATGTACCATCATCATCTCTCCCCATTAAACAACAACCATATAACATTAAACCTCATCATCATGCCTCTTCAAGATTTCATCCAACTGGGATTTTCAATAGTCACATGATGACAAGATCAAGTTCATTGGAGGACAAAGATTCAAGGTTATATGAAGCAAGCTCACATCTACTTGATGTAAGGGATGCAATAATAAGAAGAAATAATAGTAGTAATAGTAATGGAGCTTTTAGGTCTTGCCAAATACTTGAACAAGTGAAGTGGCCTCCTCCTCCTCCTAGAGGAACCTTAAAGGATAAGAATGATAATGGATCACAAGAAAGTGAGAAACATGAAACTTTAGTAGCCATTTCAATGGATGACAACAATACTAGATTTGGTGCACAACCTTCATCACAACAATGGAGCACTACTACCTTGGCTGATTATCAATGTCATCATCATCAAAGAAGTTCTTGCAGTGTTGCCTTCCCTGCTGGCCATCATGCCAAGTTAGATGCTCAGGTACATGATCTAAAAAACCAAATGCATGATGAGAAGAAGAAAGGGTCGTCATCATCATCGAGTTTCCTAGAGCTTAAGCTAAGCCAAGACTCATTAGAAAACCCACAAAGTGAACAAGAAATCAATACTAAACTTTCTCTTTCGTTGTTCTCTTCATCATCAAATTCAAGTGATTACAAACACAAAGAGAAGAAAACCCAGGTTGAGCGTTTATTTTTACAACAAAATTTCACACAAAGGAGTCTATTGGGCTGA 1365 0.3788 MGERISEGKEGSCCLITSPNNGSRKRSFIDLNEEAGDDENRSNKNDNEICSSSWQEGNLSSSNNNNATSSSEEEEEEEEDDKNNNKGRRTSMVRQYVRSKMPRLRWTPDLHLAFVQAVNRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQSRAMQQGRHQILEMYQRLNVQAHFGVDNIINRSSSYVPSSSLPIKQQPYNIKPHHHASSRFHPTGIFNSHMMTRSSSLEDKDSRLYEASSHLLDVRDAIIRRNNSSNSNGAFRSCQILEQVKWPPPPPRGTLKDKNDNGSQESEKHETLVAISMDDNNTRFGAQPSSQQWSTTTLADYQCHHHQRSSCSVAFPAGHHAKLDAQVHDLKNQMHDEKKKGSSSSSSFLELKLSQDSLENPQSEQEINTKLSLSLFSSSSNSSDYKHKEKKTQVERLFLQQNFTQRSLLG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01789 454 MobiDBLite consensus disorder prediction 27 45 - -
Adu08g01789 454 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 102 157 IPR006447 GO:0003677
Adu08g01789 454 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 37 436 - -
Adu08g01789 454 MobiDBLite consensus disorder prediction 286 313 - -
Adu08g01789 454 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 158 IPR017930 -
Adu08g01789 454 Pfam Myb-like DNA-binding domain 104 154 IPR001005 -
Adu08g01789 454 MobiDBLite consensus disorder prediction 46 69 - -
Adu08g01789 454 Gene3D - 101 158 - -
Adu08g01789 454 Coils Coil 364 384 - -
Adu08g01789 454 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 37 436 IPR044848 GO:0003700
Adu08g01789 454 SUPERFAMILY Homeodomain-like 100 156 IPR009057 -
Adu08g01789 454 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01789 Adu-Chr8 29510181 29514862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01789 90 161 G2-like Transcription Factor Family AT2G42660 79.167 3.24e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu08g01789 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01789 - - aip:107612165 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01789 08 29510181 29514862 Adu08g01789 08 29510181 29514862 ECH