Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01786 ATGTGTTGGTTGCATGATGAGGCAGAACTACATAGGAGCTGTGTCGCCGTTGTAGGAACCTGCGTCGTCTCTTCTGTTCGAGCTCTATCTCTTTGTGTTTGCCGGTGTCGTCGTCTCCTCACCGTCACTCCCCTTCCTTCTCGCCGCCGGTGGAGGAGTGCTCTTTGGTGGAGGACGTTTTTCACCACAGCAGTAGTTGCTATTGTTTTAAGAGCTGCAATTCAGCTTTACGCCACCAGGAAATGCGGCTTATTCGGAGAAGGTGGTCTGATAATGTATGATGTTGGTTCTTCCCAAGGCTCTCACACTCTCACCTCTCTACCTCACTCACCTTCACCACACGATCACCGCCTCGTCTCCGCgcctctcgctggaaactctgcctcatctccgtgccgccagttgttgatcgcatctgcttctgtagagGCTGCAGCTTGGTACAATTGA 450 0.4422 MCWLHDEAELHRSCVAVVGTCVVSSVRALSLCVCRCRRLLTVTPLPSRRRWRSALWWRTFFTTAVVAIVLRAAIQLYATRKCGLFGEGGLIMYDVGSSQGSHTLTSLPHSPSPHDHRLVSAPLAGNSASSPCRQLLIASASVEAAAWYN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01786 149 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 50 103 - -
Adu08g01786 149 PRINTS Plant CLC chloride channel signature 61 71 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu08g01786 149 PRINTS Plant CLC chloride channel signature 79 86 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu08g01786 149 PRINTS Plant CLC chloride channel signature 47 55 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu08g01786 149 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 50 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01786 Adu-Chr8 29488067 29492700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01786 51 104 Ion Channels AT5G33280 66.667 3.92e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01786 K05016 - gmx:100777170 85.5001