Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01772 ATGGTGGTAATAGCAGTGAATACAGAGAAGcgggtgaagaaagaaagggagcattccgactcatggcatccgacggagCTCGGCCACAAATCCGACGGCCAAACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCAATCATCGCCGCCATCGGAACCGGAACCACTCCCGCTAGCTTCTCCTCCGTTTCCGTTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTTCTCAACCTCCGCAACATCTTCGCTTGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATATTCGGCAAGCGCATACGCACCAACGACGACGCTTCCGCCAAGGATGACGGCGTCTCCATGGGGTCCTCAGTGGGCCCCGGAGCTCCCGCGGGGCTTTGGGCCCTCCCGGCCAGGCCCGATTTTGGTCAAAATTTGGAGTTTCGCAGCGGCTGCTCCTCCGCCGGAGATGGTTCTGTAGTCGGCGGCGGCGATGTTGGTGTCTCAGCAGCAGCAAGCTTCTTTGTTCGTTCACCATCAGCATCAGCAGCAGCAACAAGCCGTGGGAGAAGCTTCGGCGGCGAGGCTGGAAAATTACCTTCCTGGACTTCTGAATTTGCTGGCTTATTTGTCGGGAGGGCCCAGAAACTCCGGCCAGAGAGACGATGA 666 0.5511 MVVIAVNTEKRVKKEREHSDSWHPTELGHKSDGQTIEWLLRQAEPSIIAAIGTGTTPASFSSVSVSVSVRGGAGSLSSPFSTSATSSLDHKPLLAPTPFIFGKRIRTNDDASAKDDGVSMGSSVGPGAPAGLWALPARPDFGQNLEFRSGCSSAGDGSVVGGGDVGVSAAASFFVRSPSASAAATSRGRSFGGEAGKLPSWTSEFAGLFVGRAQKLRPERR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01772 221 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 26 151 - -
Adu08g01772 221 Pfam TCP family transcription factor 26 82 IPR017887 -
Adu08g01772 221 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 151 IPR005333 GO:0003700
Adu08g01772 221 ProSiteProfiles TCP domain profile. 1 50 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01772 Adu-Chr8 29145704 29147405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01772 26 147 TCP Transcription Factor Family AT5G23280 58.730 4.48e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu08g01772 TCP 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01772 K16221 - aip:110269354 173.711