Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01740 ATGAAGACGTTTCCTCCCTCCGACACCTTTTACTGGTACAAGAATGAAGACGTTTCCTCGTACCGAAGTGGCTTGGAGCTGTGGAACCATCATCATCATCATCACCAACCGGAACACGACCTCATACCTCAAGCAAGATCTTTACAGCTTCGCGGCTGCTCTAGGAGTGGGTCCAACCACCGTGTCCGACGATCAGTCACCCTCGAGATCGGCCTTCCTGGTGACGGCGTCGGCCGTGGGGAGCGGAGCAGCAAGTGGAGCAGGACATGCTGCAAGAGCCGTGGCTTCGATTGCCAAACCCATGTGAAGAGCACTTGGGTTCCCGCTTCCAAGCGCCGCGAGAGGCACCAACAACTCTCCTCTATCCAACAACAGCTTCTTGCTGCTGATGTTCCCAAGCGCCAAAGAGATCATGCCTGGTGGCTGGCAGCAGCAGAGGAGGAAGACGaaagatga 456 0.5526 MKTFPPSDTFYWYKNEDVSSYRSGLELWNHHHHHHQPEHDLIPQARSLQLRGCSRSGSNHRVRRSVTLEIGLPGDGVGRGERSSKWSRTCCKSRGFDCQTHVKSTWVPASKRRERHQQLSSIQQQLLAADVPKRQRDHAWWLAAAEEEDER 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01740 151 Pfam Domain of unknown function (DUF702) 87 132 - -
Adu08g01740 151 PANTHER PROTEIN SHI RELATED SEQUENCE 7 6 138 - -
Adu08g01740 151 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 6 138 IPR007818 GO:0003700|GO:0006355
Adu08g01740 151 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 87 112 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01740 Adu-Chr8 28669991 28670510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01740 88 137 C2H2 Transcription Factor Family AT5G66350 76.471 1.24e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu08g01740 DUF702 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01740 - - adu:107462205 283.878