Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01737 ATGGATGATGGAGAAGTTTCAAATGCTGCTTTCCCTCTTCATCACAACAACCAAACTCATCATCCAACTTCTAACAATCCTCCACCTTTGAAAAGGAAGAGAAACCTACCTGGAAACCCAGATCCTGAAGCTGAAGTGATAGCCTTATCACCCAAGACTCTGATGGCGACAAACAGGTTCGTGTGTGAGATTTGCCTAAAGGGTTTCCAAAGGGATCAGAATCTTCAACTCCATAGAAGAGGACACAACCTTCCATGGAAGCTGAAGCAGAGAACAACAAAAGAAGTAAGGAAGAGAGTGTACGTGTGCCCGGAGAAAAGCTGCGTCCATAACCACCCTTCAAGAGCCTTAGGAGACTTAACAGGGATCAAGAAGCACTTTTGCAGAAAGCATGGGGAGAAGAAGTGGAAGTGTGACAAGTGCTCAAAGCGTTATGCTGTACAATCAGATTGGAAAGCACACTCCAAAACCTGTGGTACCAGGGAATACAAATGTGACTGTGGAACCATCTTTTCACGGAGGGACAGTTTCATCACACACAGGGCTTTCTGTGATGCCTTAGCAGAAGAAACAGCAAGGGTAAACGCAGCATCAACCATAAACCACACATTATTAGGTGCTAACAACATTGCTTACACCCTCATGCAGCAGCAAAATCATCATCCTTTGGTTCCTAATAACATGTCAACCCATTTCTCTTCAATTTTCAAGCCAATTTCTTCATCCACTACTGATGAAATAAGCAGCAATAGCCAAACATCTTCTAGACCCTTATCCCTTTGGAACATGGGTCATCACCCTCATGACACAACAACAATAATGCCAATTACTCACAACAATTTGCATGATATTCATCACCAAATTGGATTTGCTACAAACCCTCCTCCACCATCAATTTGGATGTTTGGAAACAAACATCCCTCCAATGGAAGCCAGCAAGAGATAATAACTAGCACTACAAGTGCTAATTCACTTCCATTAATGAACATTGTCAAGAATAATAATAATAACAATAATAGTAATAATAATAACAATAATAATCATGTTGCAAACCAGCTTGTAAGTGTTCCTTCGTTGTATAGCACCCAACACCAATCCCATGATCATGATCAAACAACAACAACATCTTCATCAGCAGCAAACATGTCAGCCACAGCTTTATTGCAAAAAGCGGCTCAAATTGGATCAACTTCTTCAACTGATCCATCATCATTTCTTGGGAGCATAGGTTTGAAATGCAGTAACAATAATAACCAAGGGCAAGATGGGAATAACAAATTTTGTGGGATTTACAGTTCAAGTTGGAGTGAGCCAGAGAGCTCTACGGGTGATTTGACACAAATGCCCCCTACAAAAAGAATGCGTGTGCAGAATGAAGATGGCAGTGCAGGGGGACAAACTAGGGATTTTCTCGGTGTTGGCGTGCAAACCATTTGCCACCCTTCATCTATCACTGGCTGGATTTGA 1467 0.4179 MDDGEVSNAAFPLHHNNQTHHPTSNNPPPLKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTTKEVRKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASTINHTLLGANNIAYTLMQQQNHHPLVPNNMSTHFSSIFKPISSSTTDEISSNSQTSSRPLSLWNMGHHPHDTTTIMPITHNNLHDIHHQIGFATNPPPPSIWMFGNKHPSNGSQQEIITSTTSANSLPLMNIVKNNNNNNNSNNNNNNNHVANQLVSVPSLYSTQHQSHDHDQTTTTSSSAANMSATALLQKAAQIGSTSSTDPSSFLGSIGLKCSNNNNQGQDGNNKFCGIYSSSWSEPESSTGDLTQMPPTKRMRVQNEDGSAGGQTRDFLGVGVQTICHPSSITGWI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01737 488 MobiDBLite consensus disorder prediction 436 468 - -
Adu08g01737 488 MobiDBLite consensus disorder prediction 360 379 - -
Adu08g01737 488 MobiDBLite consensus disorder prediction 11 30 - -
Adu08g01737 488 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Adu08g01737 488 MobiDBLite consensus disorder prediction 436 453 - -
Adu08g01737 488 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 17 479 - -
Adu08g01737 488 PANTHER F-BOX ASSOCIATED PROTEIN 17 479 - -
Adu08g01737 488 SUPERFAMILY beta-beta-alpha zinc fingers 59 156 IPR036236 -
Adu08g01737 488 MobiDBLite consensus disorder prediction 1 43 - -
Adu08g01737 488 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Adu08g01737 488 Gene3D Classic Zinc Finger 93 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01737 Adu-Chr8 28607276 28610368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01737 24 488 IDZ Gene Family AT1G03840 51.976 1.63e-145 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu08g01737 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01737 K25870 - gmx:100778666 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01737 08 28607276 28610368 Adu08g01737 08 28607276 28610368 ECH