Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01731 ATGCTTGCGGTGTCACCTTTGAGGACCAACAGAGATGATGAAATCCAAGGACAGGACATGGAGACCTTATCCATCATTGGAGAAGACGACTTTGCTGAATTATCCGAGGGCAACTTGTTGGAAAGCATCAACTTCGACGATCTCTTCGCCGGCATCAACCACGCAGATGTCTTGCCGGATCTCGAAATGGATCCTGACATCTTCGCCGACTTCTCACTCAGCGGTGCCGCTCACAATTCTTCATCCGTAGTCTTGAATGGTTGTGGTAAATCGGTTTCTTCGGAATCCCGGTCGAGTAGTCGAGGGGAGGAGATAGTGAGCAAAAGAGATGGATCCGTCGTAGTGAATCCATCCCCTAGTAATAAAGAAGGTGATAATAAAGGAAGAAAATCATCCTCCTCCTCATCATGTCAATCAAAGAATCCTCATCAAACCAAGAAAAAGGTTAAGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTTGTTCAAGCAGTGGAGCAGCTGGGAGTTGATAAAGCAGTCCCTTCAAGGATTCTAGAGATCATGGGAATTGACTGCCTCACCCGCCATAACATCGCTAGCCACCTTCAGAAATATCGATCACATAGGAAGCATATACTAGCTCGGGAGGCTGAAGCAGCAAGTTGGAGTCAACGGAGGCAGATGTATGGTGGAGGGAGAGGGAAGAGAGAGGTGAGCCCTTGGGTTGCACCAACCATTGGTTTTCCTCCCACTCCAATTACACCAATGCCGCCCCAGTTTAGACCCTTACATGTGTGGGGTCATCCCACCATGCACATGTGGCCGCCTAAACCTCATCAGCCACCGCCTCCTGCACCTTGGCCTTCCGACCCTTCTTTTTGGCACCACCCTCACCACCAAAGGGCTCATCAAAAGGCAGTACCCACAGGAACACCGTGTTTTCCACAACCTCTGACAACAACGAGATTTGGTTCTCCGCCAACCACCACCGTGGCGGGTATCCCACCACCACCGCGTGCCATCTATAAAGTAGATCCCGGCATGCCCAAGCCCCTAGTTGACTTCCATCCGTCAAAGGAAAGCGTAGATGCTGCGATTGGTGATGTATTATCAAAACCATGGCTGCCACTGCCACTTGGGCTTAAAGCTCCAGCGGTAGAGTGTGTGGTGGGTGAGTTACAGAGACAAGGAATTCCAAAAATTCCACCCGCAACTCCTGTGCTTAATTAA 1215 0.5012 MLAVSPLRTNRDDEIQGQDMETLSIIGEDDFAELSEGNLLESINFDDLFAGINHADVLPDLEMDPDIFADFSLSGAAHNSSSVVLNGCGKSVSSESRSSSRGEEIVSKRDGSVVVNPSPSNKEGDNKGRKSSSSSSCQSKNPHQTKKKVKKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHILAREAEAASWSQRRQMYGGGRGKREVSPWVAPTIGFPPTPITPMPPQFRPLHVWGHPTMHMWPPKPHQPPPPAPWPSDPSFWHHPHHQRAHQKAVPTGTPCFPQPLTTTRFGSPPTTTVAGIPPPPRAIYKVDPGMPKPLVDFHPSKESVDAAIGDVLSKPWLPLPLGLKAPAVECVVGELQRQGIPKIPPATPVLN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01731 404 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 400 - -
Adu08g01731 404 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 150 203 IPR006447 GO:0003677
Adu08g01731 404 MobiDBLite consensus disorder prediction 88 152 - -
Adu08g01731 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 205 IPR017930 -
Adu08g01731 404 Pfam Myb-like DNA-binding domain 152 201 IPR001005 -
Adu08g01731 404 Gene3D - 145 207 - -
Adu08g01731 404 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 400 IPR044825 GO:0003700|GO:0045893
Adu08g01731 404 SUPERFAMILY Homeodomain-like 150 206 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01731 Adu-Chr8 28550506 28555616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01731 1 290 G2-like Transcription Factor Family AT5G44190 44.620 3.82e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu08g01731 Myb_DNA-binding 5.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01731 - - pvy:116113383 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01731 08 28550506 28555616 Adu08g01731 08 28550506 28555616 ECH