Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01730 ATGGCAAATAAACACGCCATAGGAATCGATCTTGGCACCACATATTCATGTGTTGCTATCTGGGAGGAGCGAAATTCTCGCGCCGAGATCATTCACAACGATCAAGGAAACAGAACAACCCCTTCTTTTGTTGCTTTCACTGATTCACAGGAATTGGTCGGGGATGCTGCCAAAAATCAGGCTTCAACCAACCCAACTAACACTGTCTTTGATGCTAAGAGGTTGATTGGTAGGAAATATAGCGATCCTGTTATTGAGAATGATTTGAAGCTTTGGCCGTTTAAGGTTGTAGCCGATGCTGAAGACAAGCCAAAGATTGTTGTTAACAATAAAGGCCAAGAAAAGGAACTTACTCCTGAAGAGATTTCATCTATGATCCTCACAAAAATGAAGGACATTGCAGGGGCATTTTTGGAATCTCCTGTGACTGATGCTGTTGTTACTGTCCCTGCTTATTTCAGCCACTCTCAGCGGAAAGCCACAAAAGATGCCGGAACCATTGCCGGCCTAAATGTTATGAGGATCATCAATGAACCTACAGCTGCGGCTCTTGCTTATGGCCTTCAGAAGAAGCCTAATTGCGTCGAAAAGCGCAATGTTAAGGCCACCGCCGGAGACACTCATTTAGGAGGAGAAGATTTTGACAATAGAATGGTGAGTTATCTTGCTAAAGAGTTCAAAAAGAAGCACAAAGAAGACATGAATGGGAACTCAAAAGCTTTAAGGAGGTTGAGAAATGAGTGTGAGAAAGCCAAGAGAATACTCTCATATAACAATGAAGCCACCATTGACATAGATGCTTTGTTTCAAGGCATTGACTTCCATTCAACCATGACTCGTGCCAGGTTTGAGAAACTCAACGATGATCTATTTGAGAAGTGTATGGACACAGTTAAGAGGTGTCTTGATGATGCCAGAGTCGACAAGAACCATGTACATGACATAGTTCTTGTCGGCGGCTCATCAAGAATCCCCAAAGTTCAGAAGCTTCTGCAGAGTTTCTTTCCCGGAAAGGAACTCTGCAAGAGTATCAACCCCGACGAAGCCGTCGCTTATGGCGCCGCCGTTCAGGCTTACATGATAAATAACGGTCAGGGAGGCAATGATAGTAAGACTTTGAAGAACTTGGTCTTAATGGATGTTACTCCGCTTTCGCTGGGAACATCGATAAAAGGGGATCTCATGAGTGTTTTGATTCCAAGAAATACTCCAATTCCTGCAAAGAAGAAAGGAACATACTTCACAGATTCTGATGACCAACCTACAGTTTGCGTTGATGTGTATGAAGGAGAGAGGTTAAGAGCAAGTGAGAACAACATGCTTGGATTGTTCTCTTTCGATGTTCCTCCGGCCCCACGGGGCTTTCCAATCTATATATGTTTCGATGTAAACGAAGATGGGATCCTGAGTGTGTCTGCGGAGGAAAAACTCACCGGAAAGAAACAAGAGATTACAATAAATAATGGCACGGGAAGGTTTTCGGCCAAGGAAGTTGCGAAAATGATTGAAGAAGCTGAAATGTTGAAGGATGAAGATGAGAAGTACAAAGAGAGAGTTAAAGCAAAGAATGCTTTGGATGAATGTGTGTATAAAGTGAAGAAAGCTATCAAGGATGGGAACTTTTTCTCTAAGGTTTCTGCAATGGATAAACAGAGGATTATGGCTGCTATTAGAGAGGCCAGAGAAATGGTTAATAATGATGGGGTGGAGCAAGGGGAAACGTATCAGTATAAGAAGTGTTTGATGGAGTTGCAGAGTGTTACTAATGAAATAATGGGCAAAATTAACAGTGATTATGAAGAAGGTGATAATGAGGATTAA 1821 0.4239 MANKHAIGIDLGTTYSCVAIWEERNSRAEIIHNDQGNRTTPSFVAFTDSQELVGDAAKNQASTNPTNTVFDAKRLIGRKYSDPVIENDLKLWPFKVVADAEDKPKIVVNNKGQEKELTPEEISSMILTKMKDIAGAFLESPVTDAVVTVPAYFSHSQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKKPNCVEKRNVKATAGDTHLGGEDFDNRMVSYLAKEFKKKHKEDMNGNSKALRRLRNECEKAKRILSYNNEATIDIDALFQGIDFHSTMTRARFEKLNDDLFEKCMDTVKRCLDDARVDKNHVHDIVLVGGSSRIPKVQKLLQSFFPGKELCKSINPDEAVAYGAAVQAYMINNGQGGNDSKTLKNLVLMDVTPLSLGTSIKGDLMSVLIPRNTPIPAKKKGTYFTDSDDQPTVCVDVYEGERLRASENNMLGLFSFDVPPAPRGFPIYICFDVNEDGILSVSAEEKLTGKKQEITINNGTGRFSAKEVAKMIEEAEMLKDEDEKYKERVKAKNALDECVYKVKKAIKDGNFFSKVSAMDKQRIMAAIREAREMVNNDGVEQGETYQYKKCLMELQSVTNEIMGKINSDYEEGDNED 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01730 606 Gene3D Actin; Chain A, domain 4 210 293 - -
Adu08g01730 606 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 200 - -
Adu08g01730 606 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 57 65 - -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 344 364 - -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 145 165 - -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 312 328 - -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 454 470 - -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 35 47 - -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 5 18 - -
Adu08g01730 606 PRINTS 70kDa heat shock protein signature 375 394 - -
Adu08g01730 606 Coils Coil 227 247 - -
Adu08g01730 606 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 370 522 IPR029047 -
Adu08g01730 606 Gene3D - 342 358 - -
Adu08g01730 606 Gene3D - 70 121 - -
Adu08g01730 606 Gene3D - 1 200 - -
Adu08g01730 606 Pfam Hsp70 protein 199 595 IPR013126 GO:0005524|GO:0140662
Adu08g01730 606 Pfam Hsp70 protein 6 192 IPR013126 GO:0005524|GO:0140662
Adu08g01730 606 PANTHER HEAT SHOCK 70 KDA PROTEIN 199 596 - -
Adu08g01730 606 ProSitePatterns Heat shock hsp70 proteins family signature 3. 315 329 IPR018181 -
Adu08g01730 606 SUPERFAMILY Actin-like ATPase domain 199 360 IPR043129 -
Adu08g01730 606 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 521 600 IPR029048 -
Adu08g01730 606 Coils Coil 498 518 - -
Adu08g01730 606 Gene3D - 523 597 IPR029048 -
Adu08g01730 606 Gene3D - 201 341 - -
Adu08g01730 606 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 373 526 IPR029047 -
Adu08g01730 606 PANTHER HEAT SHOCK PROTEIN 70KDA 4 200 IPR013126 GO:0005524|GO:0140662
Adu08g01730 606 PANTHER HEAT SHOCK PROTEIN 70KDA 199 596 IPR013126 GO:0005524|GO:0140662
Adu08g01730 606 SUPERFAMILY Actin-like ATPase domain 5 190 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01730 Adu-Chr8 28535198 28537166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01730 6 595 Calmodulin-binding Proteins AT3G12580 58.766 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01730 K03283 - gmx:102667578 728.783