Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01717 ATGACTACCAAGGGAAAGCATACCGCTAGCAAGGAAAAGCACCCCGCTAGCAAGAAGGAGCCAAACAATAATATTGCCAAGGAGGTTCATTACAGGGGTGTAAGGAAGAGGCCATGGGGCCGTTACGCCGCTGAGATCCGCGATCCCGGAAAGAAGAGCCGCGTTTGGCTCGGAACATTCAACACAGCTAAAGAAGCCGCCATGGCCTACGACGCCGCTGCCAGGCAATTCCGCGGCGCCAAGGCCAAGACCAATTTCCCTTACGCTTCCCGCCGCGAAAACGAGAACATCTTTGCCGTCGCCGGCAGGAAATGCGACATCGTTGAGTCTTATCCGATTGATTCTGCGCCTGAGCGTGACGTGACACTGCGGACAGAAGTAGATCGATTTTTCCCGTTTGTTCCATACTGTGGTGGTGAAGCGGTGCGTCCCGTTTTTCTGCCTGAACCGGTTGGTAGAGTTGAGTTCGTTGGCGAACAGAGTTGTTGTCCTTTCCGGTTGGAGCCGGCAAAGATGAGTGAGTTTAATGCACAGTCTGGGAGTGGAGCCCAGAGTAACTTGGATTCAACATCAGCCGTCGATTGCAAACCAAATGGAGTTCTTAATCTTGATCTGAAGCTCGCTCTACCCATTGGCCATTGA 642 0.528 MTTKGKHTASKEKHPASKKEPNNNIAKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFNTAKEAAMAYDAAARQFRGAKAKTNFPYASRRENENIFAVAGRKCDIVESYPIDSAPERDVTLRTEVDRFFPFVPYCGGEAVRPVFLPEPVGRVEFVGEQSCCPFRLEPAKMSEFNAQSGSGAQSNLDSTSAVDCKPNGVLNLDLKLALPIGH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01717 213 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 101 - -
Adu08g01717 213 MobiDBLite consensus disorder prediction 1 30 - -
Adu08g01717 213 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Adu08g01717 213 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Adu08g01717 213 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Adu08g01717 213 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Adu08g01717 213 CDD AP2 30 89 IPR001471 GO:0003700|GO:0006355
Adu08g01717 213 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Adu08g01717 213 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Adu08g01717 213 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Adu08g01717 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 9 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01717 Adu-Chr8 28384699 28385571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01717 23 211 AP2-EREBP Transcription Factor Family AT5G44210 42.132 1.22e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu08g01717 AP2 7.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01717 K09286 - qsu:112001675 154.836