Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01711 ATGGACCGGGGTGGTGGTGAAGACGCGCCGCTAGAGGCGAAGAGGGAGCCTAAGCCGGATGAAGATCATAATAATAATAATAATAAGAAGAAGAAGAAAGAAGTGCCGGTGACATGGGTTAGCGGGAAGAAAGGTTCCGGTGGTGGCATGCGGTGTTGTCAAGCTGAGAAGTGCAAGGCGGATCTTGAGGAGGCAAGGCAGTACCATAGGAGGCACAGGGTGTGTGAGTACCATGCCAAGGCTCAGGTGGTTCTTGTTTCCGGCATTAGACAACGCTTCTGTCAGCAATGTAGCAGGTTCCATGAGATAGGTGAATTTGATGACACAAAAAGAAGTTGCCGGAGGCGTTTGGCCGGACACAACCAACGGCGAAGAAAGAACTGTGATTCTCAAGCAGAAGGGTCGAGGCGCAAAGGGATATGTCCTCAGTTGAAGAAGGACACTGCCTGTGGAGATGATAGGAGCAGAATTCAGATTGCAATCCAAGAGAGTGGAGCTTATAAACATTTCCAGATAAGATGA 522 0.4943 MDRGGGEDAPLEAKREPKPDEDHNNNNNKKKKKEVPVTWVSGKKGSGGGMRCCQAEKCKADLEEARQYHRRHRVCEYHAKAQVVLVSGIRQRFCQQCSRFHEIGEFDDTKRSCRRRLAGHNQRRRKNCDSQAEGSRRKGICPQLKKDTACGDDRSRIQIAIQESGAYKHFQIR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01711 173 Gene3D - 44 114 IPR036893 GO:0003677|GO:0005634
Adu08g01711 173 MobiDBLite consensus disorder prediction 1 41 - -
Adu08g01711 173 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 35 173 IPR044817 GO:0003677
Adu08g01711 173 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 35 173 - -
Adu08g01711 173 MobiDBLite consensus disorder prediction 1 38 - -
Adu08g01711 173 Pfam SBP domain 53 126 IPR004333 GO:0003677
Adu08g01711 173 ProSiteProfiles Zinc finger SBP-type profile. 50 127 IPR004333 GO:0003677
Adu08g01711 173 SUPERFAMILY SBT domain 51 130 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01711 Adu-Chr8 28259351 28260333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01711 40 159 SBP-box Gene Family AT1G53160 56.000 8.20e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Adu08g01711 SBP 7.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01711 - - ccaj:109810441 214.157