Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01702 ATGGATCATCATCAGCAGCAGCAGCATCAACAAGGAAGTGAACCTTCTACAACAACCAAAGTTGAAAGAAAGATCATAGAGAGAAACAGAAGAAATAAAATGAAGGATCTCTACTCCAAACTCAACTCTCTTCTCCCAAGCTATAGCCCCACGGAAGTGTTACCATTGCCTGATCAAATAGATGAAGCCGTGAAATATATCAAAAGCTTAGAGAAGAAGGTGAAGATGGCAAAGGAGAAGAAGGAGAGGTTGCTAAAAGGGAGGAATAACAAGAAGAGATCTCGCGGTTTCGATGAGAAAAATATTACAAAATCTCCAATGATAGATGTTCATGAAATGGGTAATTCCTTGCTTCAAGTGGTCTTGACATGCGGGTTTGAGAACAAGTTCCTTTTCAATGAGATTATTCGCATATTGCATGAAGAGAAGGTTGAGATTGTTAGTGTCAATTCTTCTTCGCAACCTGGAGATTCAATGATTCATGTTTTGCATGCAGAGATTCCTTCCGCATTCCAGCAATTTGGAGCGGCAAGAGTGAGTGAGAGATTGAAGAGGTTTGTGAATGGATCAATCAGTGATGTGGATATAGATCCAGGGTTTTGGGATGATTTTGAAATTGATACTGACATTTGGGAGCTTCCAGATCTTTCATCAGTAGTAAGTAAGGGTTTTCCAAATCCTTTGTAA 687 0.3959 MDHHQQQQHQQGSEPSTTTKVERKIIERNRRNKMKDLYSKLNSLLPSYSPTEVLPLPDQIDEAVKYIKSLEKKVKMAKEKKERLLKGRNNKKRSRGFDEKNITKSPMIDVHEMGNSLLQVVLTCGFENKFLFNEIIRILHEEKVEIVSVNSSSQPGDSMIHVLHAEIPSAFQQFGAARVSERLKRFVNGSISDVDIDPGFWDDFEIDTDIWELPDLSSVVSKGFPNPL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01702 228 SMART finulus 24 76 IPR011598 GO:0046983
Adu08g01702 228 Coils Coil 60 87 - -
Adu08g01702 228 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 16 194 IPR015660 GO:0003700|GO:0006357
Adu08g01702 228 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 86 IPR036638 GO:0046983
Adu08g01702 228 MobiDBLite consensus disorder prediction 1 22 - -
Adu08g01702 228 Pfam Helix-loop-helix DNA-binding domain 20 71 IPR011598 GO:0046983
Adu08g01702 228 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 70 IPR011598 GO:0046983
Adu08g01702 228 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 16 194 - -
Adu08g01702 228 Gene3D - 8 97 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01702 Adu-Chr8 28118403 28119497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01702 21 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.640 2.35e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g01702 HLH 2.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01702 - - aip:107610492 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01702 08 28118403 28119497 Adu08g01702 08 28118403 28119497 ECH
Adu08g01702 08 28118403 28119497 Adu03g01433 03 21469751 21470943 PCT