Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01701 ATGGAAAGGAAGATCATAGAGAGAAACAGAAGAGAACAAATGAAGAACCTTTGTTTCAAGCTCAATTCTCTTCTCCCTAACTTCAACCCCAAGCAAACATTGCCACCACGTGTTGACCAAATAGATGAGGCCATCATCTACATCAAAACCCTAGAATCAAGGGTTGAGATTGCTAAGGAGAAGAAAGAAAGCTTATTAAACAAGGGAATGAAGAAGAGACCTCATGATTTAGCAGGTAGCAGTGCCTTTGATGATGAAACTCAAGGAACAAGCCTAAAACCCCCAACTATTGAGATTCATGAACGTGGTTCCATGTTAGAGATAGTTCTTATGATTTCTGGCTTTGATAACCAATTCATCTTCAGTGAAATTATTCGCATATTGCATGAAGAGAATATTGAGGTCCTTAGTGCAATTTCTTCTCGCGCTGGAGATTCAATGATTCATGTTGTGCACGCAGAGAATCATCTCTATCAATTAGGAGCAACGAAAGAAATAAGTGAGAGATTAAAAAGGTTTGTGGACGCACATCGTTTGCAGGACATTCAAGGGGCCCAGGGGCCATAA 567 0.4021 MERKIIERNRREQMKNLCFKLNSLLPNFNPKQTLPPRVDQIDEAIIYIKTLESRVEIAKEKKESLLNKGMKKRPHDLAGSSAFDDETQGTSLKPPTIEIHERGSMLEIVLMISGFDNQFIFSEIIRILHEENIEVLSAISSRAGDSMIHVVHAENHLYQLGATKEISERLKRFVDAHRLQDIQGAQGP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01701 188 Pfam Helix-loop-helix DNA-binding domain 3 52 IPR011598 GO:0046983
Adu08g01701 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 51 IPR011598 GO:0046983
Adu08g01701 188 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 180 - -
Adu08g01701 188 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 180 IPR015660 GO:0003700|GO:0006357
Adu08g01701 188 Gene3D - 1 78 IPR036638 GO:0046983
Adu08g01701 188 MobiDBLite consensus disorder prediction 71 92 - -
Adu08g01701 188 Coils Coil 48 68 - -
Adu08g01701 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 68 IPR036638 GO:0046983
Adu08g01701 188 SMART finulus 4 57 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01701 Adu-Chr8 28018790 28020300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01701 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.872 2.01e-25 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g01701 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01701 - - gmx:100805461 178.718