Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01685 ATGGAGCCGCTGCTGAGAGGCGAAGGGAGTGGTGGCCGGAGGGACCACGCGCGGGGGATATTCCGCCGCTCCGACGCCATCACCTACGGCTCCAACTATGAGAAAGCTGCTGCACTCGTCGATCTGGCTGAAGATGGTGTTGGACTCCCTGAGCAAATTCTTGATTCTTCAAGCTTTCAAAGTTCTTCAAGATATTATTTCATTTTCATTAAATGCAATATCATGTGGTCTCTTGCTTATTTTGCTTTGATAGTCCTAAATTTCTTGGAGAGACCTCTGTGGTGTGAAAATTATACCAAACCATCTTGCAGCGATAGAGAGTATTTCTTTCTGGGACAGTTGCCATATCTAACTAATGCAGAATGTCTTATTTATGAGGGATTAACTGTTGTGGTGCTAATCATACATACTTTCTTCCCAATATCATATGAAGGGTCCCGTATATATTGGAGAAACGCAATTAATCTGTTGAAGGTCTTCTGTCTGTTAGTTCTCATTGCTGATATGCTGGTTTATGCTATTTACTTGTCTCCAGCGGCTTTTGATTTTCTACCTTTCAGAGTTGCTCCTTATATCAGGGTTATTCTTTTCATTCTGAATATTAGGGAGTTACGTGAAACCATCACTATCTTGAGTGGCATGGTTGGCACATACTTGAATGTCTTGGCTCTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTGGCTTATGTGATGTTTGAGGATACGATACAAGGAAAAACAGTATTCACTTCTTATGGTGCTACATTGTATCAGATATTTGTTTTATTTACTACATCGAATAATCCAGATGTTTGGGTGCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTACTTCATTATATTTGTTCTTTTGGGGGTTTACTTCGTTACAAACTTGGTCCTTGCCGTTGTTTATGATAGTTTCAAGAGTGAGCTTGTGAAACAAGTTTTCGAGATGGATCGTATGAGAAGAGCAATGTTGGAGAAAGCTTTTAATCTCTTAGATACTCATAGTACTGGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAAGAGTTGAACAAATACAGGACTTTACCCAAGATCACCAAGGAAGAATTTGAGTTAATATTTGATGAGCTTGATGATAGTCGTGACGTAAAGCTCAATAAGGATGAATTTGCTGATATTTGCCATGCCATTGCTTTAAAATTCCAGAAGGAGGATTCTATCTCTTACTTTGAGTATTTACCATTCTACAATTCACCCACCTCAAAGCAATTGAAAGAATTTGTGAAGAGACCCATCTTTGGATACCTAGTCTCTTTTCTTCTCGTACTCAATCTAGTTGCAGTTATTATTGAGACAACGCTTGATATACAAAATAATTCTGGTCAAAAGGTGTGGCAAGTGGTTGAGTTCATTTTTGGGTGGATATATGTAATAGAAATGGCTCTGAAGGTTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAATCGCTTTGATTTTGTTATCACTTGGATAATTGTCATTGGAGAAACTATAACTTTTGCTTCGCCTGATGATCAGACTTTCTTCTCGAATGGAGAATGGATCCGTTACCTTCTTCTGGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCAAGCAATTCCGAGGCTTTGTTGCAACTTTCTTAACGCTGTTGCCAAGTTTGACGCCATACTTTGGGATCATATTTTGTGTCTTATGTATTTATTGCTCGGTTGGTGTACAGATTTTTGGTGGACTTGTTAATGCTGGAAACCCTAAATTGCTAGCATCAGATCTTGCTGATAATGACTATTTGCTATTTAATTTCAATGATTATCCTAATGGAATGGTGACACTTTTCAATTTGGTAGTCATGGGGAACTGGCAAGTATGGATGCAGAGCTACAAGGAGTTAACGGGTACTTCTTGGACCTACGTATACTTCATAAGTTTCTACTTAGTCACGGTTTTGCTACTTTTGAACTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGTCACCGGACACCTGTGATGAACAGGACAAGGAAGTTGAAGGAGATAAATATCGAAGACGGTCAGTTGGGTATGTATAG 2127 0.3945 MEPLLRGEGSGGRRDHARGIFRRSDAITYGSNYEKAAALVDLAEDGVGLPEQILDSSSFQSSSRYYFIFIKCNIMWSLAYFALIVLNFLERPLWCENYTKPSCSDREYFFLGQLPYLTNAECLIYEGLTVVVLIIHTFFPISYEGSRIYWRNAINLLKVFCLLVLIADMLVYAIYLSPAAFDFLPFRVAPYIRVILFILNIRELRETITILSGMVGTYLNVLALGLLFLLFASWVAYVMFEDTIQGKTVFTSYGATLYQIFVLFTTSNNPDVWVPAYKASRWYCLYFIIFVLLGVYFVTNLVLAVVYDSFKSELVKQVFEMDRMRRAMLEKAFNLLDTHSTGYLNKDQCIRLFEELNKYRTLPKITKEEFELIFDELDDSRDVKLNKDEFADICHAIALKFQKEDSISYFEYLPFYNSPTSKQLKEFVKRPIFGYLVSFLLVLNLVAVIIETTLDIQNNSGQKVWQVVEFIFGWIYVIEMALKVYAYGFENYWRDGQNRFDFVITWIIVIGETITFASPDDQTFFSNGEWIRYLLLARMLRLIRLLMHVKQFRGFVATFLTLLPSLTPYFGIIFCVLCIYCSVGVQIFGGLVNAGNPKLLASDLADNDYLLFNFNDYPNGMVTLFNLVVMGNWQVWMQSYKELTGTSWTYVYFISFYLVTVLLLLNLVVAFVLEAFFAEMELESPDTCDEQDKEVEGDKYRRRSVGYV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01685 708 Pfam Ion transport protein 431 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu08g01685 708 Pfam Ion transport protein 76 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu08g01685 708 SMART efh_1 328 356 IPR002048 GO:0005509
Adu08g01685 708 SMART efh_1 369 397 IPR002048 GO:0005509
Adu08g01685 708 Pfam EF-hand domain pair 329 393 IPR002048 GO:0005509
Adu08g01685 708 Gene3D - 311 394 - -
Adu08g01685 708 CDD EFh 328 393 IPR002048 GO:0005509
Adu08g01685 708 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 706 IPR044581 GO:0005245
Adu08g01685 708 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Adu08g01685 708 Gene3D - 203 310 - -
Adu08g01685 708 SUPERFAMILY Voltage-gated potassium channels 430 676 - -
Adu08g01685 708 SUPERFAMILY EF-hand 314 397 IPR011992 -
Adu08g01685 708 Gene3D - 422 555 IPR027359 -
Adu08g01685 708 ProSiteProfiles EF-hand calcium-binding domain profile. 324 359 IPR002048 GO:0005509
Adu08g01685 708 Gene3D - 556 704 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01685 2 706 Ion Channels AT4G03560 67.893 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01685 K16900 - gmx:100806160 1113.6