Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01655 ATGGGGTGTTGTGTTTCAACAAGCAGTAAGAGCAGTTGTAGTAGTAAGAGCAATGGAGACTCAGACTCTCCATCTTGTTTAGAAATCGGTTTCTGTGGTCAAAAGAAAGCAAGGAGAACATTCTCTGATCATGTTGTTTCTCTGCATCAGTTATCATCCTTACCAAACAGGATTTTCTCCAATGGAAAGAGCCGGTCTTCTTGCATATTTACGCAGCAGGGCCGTAAGGGTGTTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGGCAGAAGATGTGACCTTCTGTGGTGTATTTGATGGCCATGGTCCTCATGGTCACCTTGTTGCACGCAAAGTTAGGGATTCCCTGCCTATCAAACTTCTTTCTTTTTTGCATTCCGGTGAATCGAGGCGAAACGGATCAGGGAAAGCTTCTTTCAAAGGGAATATAAAGCCTGACACTGAAGAGTCTGAGAAAGATTGCTCTGATGAGGATAAACTACATTCCATGTGGAGAGAAGCTTTCATGAAGGCATATAAGGCCATGGACAAAGAGCTGAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGTCTGTAACTATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTCACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGGCACCAACTCGAGCATCAGCAGCAAGGGTTCTGGTGGATTCTGCGGCCCGAGAGTGGAAACTCAAATATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGTGGAATCTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAGTCAGATGACGGTCAAACGACCGAGCCTTCTTTGCAAAGGAACTTCACTGTACGAACCTCGGAAGAAAAACAAACCTATGGAGGAATATCTGTTGATGGTGAGGATGGAGCTTCAGCAGCAGCAGCAGCAGCTGAAGATCAAAATTGGTCGGGTTTGGAAGGTGTCACCCGAGTAAACTCATTGGTCCAACTTCCTAGATTTTCTGAGGAAAAGCAAAAGCAAGCCTCATAG 1431 0.4458 MGCCVSTSSKSSCSSKSNGDSDSPSCLEIGFCGQKKARRTFSDHVVSLHQLSSLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFMAEDVTFCGVFDGHGPHGHLVARKVRDSLPIKLLSFLHSGESRRNGSGKASFKGNIKPDTEESEKDCSDEDKLHSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTSVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSHRLLTDKDEFIVLASDGVWDVLSNEEVVEIVSTAPTRASAARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDVESDCDEQCYSSATIQSNHSGNPVESDDGQTTEPSLQRNFTVRTSEEKQTYGGISVDGEDGASAAAAAAEDQNWSGLEGVTRVNSLVQLPRFSEEKQKQAS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01655 476 MobiDBLite consensus disorder prediction 1 24 - -
Adu08g01655 476 Gene3D - 56 372 IPR036457 -
Adu08g01655 476 Pfam Protein phosphatase 2C 140 348 IPR001932 -
Adu08g01655 476 SMART PP2C_4 55 368 IPR001932 -
Adu08g01655 476 MobiDBLite consensus disorder prediction 130 156 - -
Adu08g01655 476 CDD PP2Cc 65 370 IPR001932 -
Adu08g01655 476 MobiDBLite consensus disorder prediction 389 446 - -
Adu08g01655 476 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Adu08g01655 476 MobiDBLite consensus disorder prediction 389 426 - -
Adu08g01655 476 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Adu08g01655 476 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
Adu08g01655 476 SUPERFAMILY PP2C-like 57 372 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01655 Adu-Chr8 27364841 27366952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01655 1 473 PP2C-type Phosphatase Gene Family AT1G03590 69.392 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01655 - - gmx:100813306 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01655 08 27364841 27366952 Adu08g01655 08 27364841 27366952 ECH
Adu08g01655 08 27364841 27366952 Adu03g01375 03 20262733 20265022 PCT