Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01642 ATGAGtcgtgcaatcacaatcgttttcttagatgaccattcatgcggtcaatataaaagCAGTGGTGGAGGCTTGCTGTCATACTCAGAATCACAATCTGAATCTATTACCGGACCTCCTGCTTCTAATACGAATTCTGATGTGCCGGCAAAAAAGAAAGTGGTTGTTCTTGGAACAGGATGGGGTGGTACTAGTTTTCTCAAGGATCTCGATGCATCCTTGTATGATGTTCAGGTTGTTTCCCCTTGTAACTATTTTGCATTCACTCCTCTATTACCTAGTGTCACTTGTGGGACAGTTGAAGCGCGAAGCATTGTAGAGCCAGTTCGAAACATGGTCAAAAAGAGAAAAGGAGACATTAAATTCTGGGAGGCGGAATGTCTGAAGATCGACCATGCAAACAAAACGGTATTGTGTAGGTCCAATATTGGGAACAACTTAGTTGGAAGTGGCGAATTTTCTTTGGAATATGACTACTTGGTTGTAGCGATAGGAGCACAAGTGAATACTTTTAACACCCCTGGTGTCAAGGAGCATTGTCATTTTCTAAAGGAGGTAGAGGATGCACAGAAGATCAGAAGGGCTGTGATAGATTGTTTTGAGAAGGCTGTTCTTCCATCTCTATCTGACGAAGAACGAAGGACAAATCTACATTTTGTTGTTGTTGGAGGAGGTCCAACTGGGGTGGAATTTGCTGCTGAGCTTCATGACCATTTCCAAGAAGATTTAGTCAATTTATACCCATCTGTTAAAGATTTTGTGAAGATAACAGTGATTCAATCAGGAGATCACATCTTGAACACGTTTGATGAAAGAATTAGTCTATTTGCTGAAGAGAAGTTTGGAAGAGATGGTATAAAAGTTCAAACTGGATGTCGAGTTCTCAGTGTTGATGACAAAAATATTACAATGAAGGCAAAATCAACTGGAGAGATCTGCTCTGTACCCCATGGACTGGTTATCTGGTCCACTGGGATTGCAACTCGTCCGGTTGTGAGGGACTTTATGGAACAAATCGGTCAGGGTAAAAGGCATGTGCTAGCAACAAATGAATGGTTGCGAGTGAAGGGTTGTGAATCTGTGTATGCTATCGGTGATTGTTCTTCGATAGATCAACAAAAAATAATGGATGATATCTCAGCCATTTTTGAGGCTGCGGATAAGGACAAATCCGGTACCTTAACTGTTGCAGAACTCAAGGATGTGATAGATGACATAATTGTAAGATATCCACAGTTCGAACTGTATTTGAAGAGCAAACACATTTTGGATTTGAGTACTCTATGGAAAGACTCAGAAGGAAATTATAGAGAAGAAATAGACATAGAAGGCTTTAAGATGGCCCTTTCTCATATGGATTCACAGATGAAGAGTCTGCCAGCAACTGCACAGGTTGCTTCCCAACAAGGTGAATATCTAGCTAGATGCTTTAACCGCATGCATCAATGTGAAGAGCATCCGGAAGGTCCTCGGCGATTTAAAGGCTCCGGACGTCATACGTTTCTTCCCTTTCGGTATAAGCACTTTGGGCAATTTGCTCCTCTGGGAGGGGAGCAAGCTGCTGCAGAACTTCCTGGAGACTGGGTTGCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTAAGCTGGCGGACAAGGATGTTAGTCATATCAGATTGGACAAGAAGATTTATATTTGGAAGAGATTCTAGCCGTATTTAA 1722 0.4082 MSRAITIVFLDDHSCGQYKSSGGGLLSYSESQSESITGPPASNTNSDVPAKKKVVVLGTGWGGTSFLKDLDASLYDVQVVSPCNYFAFTPLLPSVTCGTVEARSIVEPVRNMVKKRKGDIKFWEAECLKIDHANKTVLCRSNIGNNLVGSGEFSLEYDYLVVAIGAQVNTFNTPGVKEHCHFLKEVEDAQKIRRAVIDCFEKAVLPSLSDEERRTNLHFVVVGGGPTGVEFAAELHDHFQEDLVNLYPSVKDFVKITVIQSGDHILNTFDERISLFAEEKFGRDGIKVQTGCRVLSVDDKNITMKAKSTGEICSVPHGLVIWSTGIATRPVVRDFMEQIGQGKRHVLATNEWLRVKGCESVYAIGDCSSIDQQKIMDDISAIFEAADKDKSGTLTVAELKDVIDDIIVRYPQFELYLKSKHILDLSTLWKDSEGNYREEIDIEGFKMALSHMDSQMKSLPATAQVASQQGEYLARCFNRMHQCEEHPEGPRRFKGSGRHTFLPFRYKHFGQFAPLGGEQAAAELPGDWVAMGHSTQWLWYSVYASKQVSWRTRMLVISDWTRRFIFGRDSSRI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01642 573 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 376 IPR023753 GO:0016491
Adu08g01642 573 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Adu08g01642 573 SUPERFAMILY FAD/NAD(P)-binding domain 216 371 IPR036188 -
Adu08g01642 573 SUPERFAMILY EF-hand 332 460 IPR011992 -
Adu08g01642 573 PANTHER NADH DEHYDROGENASE 49 573 IPR045024 GO:0003954|GO:0006116
Adu08g01642 573 Gene3D - 42 404 - -
Adu08g01642 573 Gene3D - 430 572 - -
Adu08g01642 573 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Adu08g01642 573 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
Adu08g01642 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Adu08g01642 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 54 73 - -
Adu08g01642 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Adu08g01642 573 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 49 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01642 Adu-Chr8 27166989 27171360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01642 21 573 Chloroplast and Mitochondria Gene Families AT4G21490 62.903 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01642 K03885 - zju:107416753 920.228