Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01625 ATGGCTGCTCACACCACCACCACCACCACCAACAAGAAGCATGAGCAAGTGAAGATCATAGAAGAATGTAAAGTTGCACCACCACAAGGGTCTCTTGCCTCCACCACCACCAATGTACCCCTCACTTACTTGGATATCCCATGGTTCCTATGCCATCCGATTAAGCGCATCTTCTTCTATGACTTCCCTCACTCCACCAACCACTTCCTTCAATCATCACTCCCTCCTCTCAAACACTCCCTCTCCCTTTCCCTCCAACACTTCTTTCCATTCGCCTCCAACCTCATCGTACCTCCCTCCCCAAATCTCCCCTTCATCCGTTTTCTTGACGGTCTTGACTCACTCTCTTTCACCATTGCAGAGTCTAAAGCAGACTTTTCCTTACTCGTATCTGATTCGCCACAAGATGTTCGCTTTCTACACCCTTTGGTCGCTTCCTTGCCTCCTAAGGTTACCATGGAGGATGGCACGCTTGTTATGCCTCTCATGGCCATTCAAGTCACTGTTCTTCCAAACACTGCCTTCGCCATTTCTCTAACATTCAGCCATCTCGCCGCCGATGGCTACTCGCTTCATCATTTCATCAAGTTTTGGGCCAATCTTTGCAAGCAAATAATAACAAGAGGTAGTGGAACAAATGATGAAGATGTTAAAGAATCTAGTTTTTTGTCTGTTCCTTTTCATGATAGAGACATAGTTAAGGACCCGAAAGGGCTTAAACATGTTTACATGGAAGAGGTAAGAGATTTGCTGAGGAAGAACAACAACTTGATGAATTCTCAAGTCCCTGTCAATAGTAACACCATGGTACGTGCAACTCTTGTCCTAAACCATAGTCAAGTTGAGAAACTCAAGAAATTTGTGTCTCTTAAATACCGTGACACCTATGGTTCTAATACGTTATTACACATGTCAACGTTTGTGGTCACGTGTTCATTGATTTGGGTTTGCATGATGCAATCAGAAGAACAAACCGAAGGCAATCATCATCATACTAATAAGAATTTTGATGATGAAGTTTGCTATTTCATAATTCTAGCCGATTACCGTGGCCGTTCTGAGTTCTCAATACCTTCAAATTACTTTGGGAATTGCTTATTGTCTGGATATGTGAGACTCAAGAGGGGTGAGCTAGTTGGAGAAAATAATGGTAATGATTATCATGGGATTTTTGAGGCAGCAAGTGGAATTGACAGGGAGATTAGAAATCTGAGAAATGATGCATTAACAAGGGTTGAAAGTTTTGTCCCCTATGCTAGAGAATTAAATAAATGTCGTAGTATAACTGTGGTGGCAGGGTCTCCAAAATTAGGAGTTTATGAAACTGATTTTGGGTGGGGAAAGCCTAAGAAATCTGTAGCAGTTCATGTTGAATCAGCAGGAGCATTTTCTCTTTCGGATTGTAGGAACAACGAAGGAGCGGTTGAGATTGGAATTGCACTTGAGAGGATCCGAATGAAGAAATTCATCAAAATTTTCGAACAACACCTCCAAAACATCGATCATGATTTCCCTACGTAG 1521 0.4241 MAAHTTTTTTNKKHEQVKIIEECKVAPPQGSLASTTTNVPLTYLDIPWFLCHPIKRIFFYDFPHSTNHFLQSSLPPLKHSLSLSLQHFFPFASNLIVPPSPNLPFIRFLDGLDSLSFTIAESKADFSLLVSDSPQDVRFLHPLVASLPPKVTMEDGTLVMPLMAIQVTVLPNTAFAISLTFSHLAADGYSLHHFIKFWANLCKQIITRGSGTNDEDVKESSFLSVPFHDRDIVKDPKGLKHVYMEEVRDLLRKNNNLMNSQVPVNSNTMVRATLVLNHSQVEKLKKFVSLKYRDTYGSNTLLHMSTFVVTCSLIWVCMMQSEEQTEGNHHHTNKNFDDEVCYFIILADYRGRSEFSIPSNYFGNCLLSGYVRLKRGELVGENNGNDYHGIFEAASGIDREIRNLRNDALTRVESFVPYARELNKCRSITVVAGSPKLGVYETDFGWGKPKKSVAVHVESAGAFSLSDCRNNEGAVEIGIALERIRMKKFIKIFEQHLQNIDHDFPT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01625 506 Gene3D - 266 500 IPR023213 -
Adu08g01625 506 Gene3D - 16 259 IPR023213 -
Adu08g01625 506 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 17 500 - -
Adu08g01625 506 PANTHER - 17 500 - -
Adu08g01625 506 Pfam Transferase family 31 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01625 Adu-Chr8 26942852 26944372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01625 57 494 Monolignol Biosynthesis Gene Families AT5G48930 21.413 3.78e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01625 - - adu:107462106 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01625 08 26942852 26944372 Adu08g01625 08 26942852 26944372 ECH