Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01613 ATGGTGAGAACCCCTTTGTGTGACAAGAGTGGAATGAGGAAGGGCACGTGGACACCTGAGGAAGACAAGAAGTTGGTCGCTTATGTTACTAGGTATGGTTGCTGGAATTGGCGTCTTCTCCCAAAGTTTGCAGGTCTTGAAAGGTGTGGCAAGAGTTGCAGACTTAGGTGGATGAACTACCTCAGACCCAACATCAAAAGAGGCAACTACACTCCAGAAGAAGAGGATACTATCATCACACTTCACCAAACCCTTGGCAATAGATGGTCCCTAATTGCGGCGAATTTACCAGGAAGAACTGATAACGAGATAAAGAATCACTGGCACACTGTTCTGAAGAAGCGTATTCAAGACAAGTCGTCGTCAGGCACAGGCAAAGGTAGTAAAGCCGGAAAAGCTAAAGCTTCTTACAAAGTAAAGAATAATAATAATAATAATTATGACTCCCCAACAACACTAATGGAGCAAGATTTCAATAACATTGGTGCTAGTTGTGATGATCGCCGTCATAATAATAGCCCATTGTCTCCACAACCATCCTCTAGCGGTTTCTCTTGCGTAACAACAGATACTGAAACCGCCGCTATAAACCATGAGGATAATAATTTAATTATTCTAGAGAATAATAATAATGATTACGGCGAGCTTGGTTTCTTTGATGCATATGATGAGCCAGTAAGTGCAGATTTCTGGACAGAACCATATCTGATTGACTTTTCCTATGTCCCACCCAGTAGTGAAGAATACTTTCTTAACCCTATTTGGGATATAGAATTCTGGGGCCAGAATAGCTTATACCTGGAATGA 807 0.4176 MVRTPLCDKSGMRKGTWTPEEDKKLVAYVTRYGCWNWRLLPKFAGLERCGKSCRLRWMNYLRPNIKRGNYTPEEEDTIITLHQTLGNRWSLIAANLPGRTDNEIKNHWHTVLKKRIQDKSSSGTGKGSKAGKAKASYKVKNNNNNNYDSPTTLMEQDFNNIGASCDDRRHNNSPLSPQPSSSGFSCVTTDTETAAINHEDNNLIILENNNNDYGELGFFDAYDEPVSADFWTEPYLIDFSYVPPSSEEYFLNPIWDIEFWGQNSLYLE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01613 268 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu08g01613 268 MobiDBLite consensus disorder prediction 115 150 - -
Adu08g01613 268 CDD SANT 69 112 IPR001005 -
Adu08g01613 268 SMART sant 13 63 IPR001005 -
Adu08g01613 268 SMART sant 66 114 IPR001005 -
Adu08g01613 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu08g01613 268 Gene3D - 68 147 - -
Adu08g01613 268 CDD SANT 16 61 IPR001005 -
Adu08g01613 268 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 237 - -
Adu08g01613 268 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu08g01613 268 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu08g01613 268 MobiDBLite consensus disorder prediction 164 186 - -
Adu08g01613 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu08g01613 268 Gene3D - 14 66 - -
Adu08g01613 268 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu08g01613 268 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu08g01613 268 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01613 Adu-Chr8 26731881 26732888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01613 1 123 MYB Transcription Factor Family AT2G31180 67.480 4.94e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g01613 Myb_DNA-binding 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01613 K09422 - gmx:100778518 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01613 08 26731881 26732888 Adu03g01324 03 19210067 19215089 PCT