Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01609 ATGGTAACGTTAGGATGGAAAACGCAGTGGGCTGTGGCGGAGGCTGCACGGTCAGCGGCGGACCAAGAGAGAGAAAGAAAGGAAACCATATATCCCGGCCACACACACAGAGACAGTTACAAACAGATAGAGGAAGAGACCAAAACCATACCAAAGACGAAAACCATGAAGAGCTGCGAGTTGTGCAAGGTTCCGGCCAGGACCTTCTGCGAGTCCGACCAGGCCAGTCTCTGTTGGGACTGCGACGCCAACGTTCATGGTGCTAACTTCCTCGTCGCCAGGCACACAAGAACCCTCCTCTGTCACGCCTGCCAGTCACCCACGCCCTGGAAGGCTTCCGGCGACAGGTTAGGCAACACCGTCTCGCTCTGTGAGATGTGCGCCGGCGGCAACAAGGTCTCCGCGGAGGAGAGCGAAGGAGGCAATGACGACGACATAGACACCGAGGACGACGATCTTGAAGACGAAGAAGAGGAAGAGGATGATGACGATGACGAGGTTCCCGCCGACGAGGAGGAGGAAGAAGACGGGGACAACCAGGTGGTGCCTTGGTCCTCTACGGCGCCGCCCCCGCCGGCTCCGAGTTCATCCAGCAGCGAAGAGTCGGTCAGCCGCCGGTGCAACCACGCAGACGAAGAGGATTTTTCTGAGGCAGTTCCCTTAAAACGGCATCGTCACGATGTGGATCATGATGATTTTCTGGAGGGTTCGAAAGCTTGGAGATATAAACGGAGATACGGGGGGAGTGGAGAGAGGAGGTTGCTTGCAGTTGCTGATGCGTTGGTAGAGCCTCCGAAACCGTTTGATCAGGAGAGCACGTGGCGTTATCTTAGCCGCACGATCTTTTGGCGTTGGTACTATAAGAAATTATTTGTGCTTCAGCTCTTTGATTAA 894 0.5537 MVTLGWKTQWAVAEAARSAADQERERKETIYPGHTHRDSYKQIEEETKTIPKTKTMKSCELCKVPARTFCESDQASLCWDCDANVHGANFLVARHTRTLLCHACQSPTPWKASGDRLGNTVSLCEMCAGGNKVSAEESEGGNDDDIDTEDDDLEDEEEEEDDDDDEVPADEEEEEDGDNQVVPWSSTAPPPPAPSSSSSEESVSRRCNHADEEDFSEAVPLKRHRHDVDHDDFLEGSKAWRYKRRYGGSGERRLLAVADALVEPPKPFDQESTWRYLSRTIFWRWYYKKLFVLQLFD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01609 297 MobiDBLite consensus disorder prediction 204 222 - -
Adu08g01609 297 CDD Bbox1_BBX-like 59 100 - -
Adu08g01609 297 MobiDBLite consensus disorder prediction 133 222 - -
Adu08g01609 297 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 56 238 - -
Adu08g01609 297 ProSiteProfiles Zinc finger B-box type profile. 54 100 IPR000315 GO:0008270
Adu08g01609 297 MobiDBLite consensus disorder prediction 17 38 - -
Adu08g01609 297 Pfam B-box zinc finger 56 98 IPR000315 GO:0008270
Adu08g01609 297 SMART bboxneu5 54 100 IPR000315 GO:0008270
Adu08g01609 297 MobiDBLite consensus disorder prediction 140 179 - -
Adu08g01609 297 PANTHER - 56 238 - -
Adu08g01609 297 MobiDBLite consensus disorder prediction 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01609 Adu-Chr8 26598613 26602648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01609 57 193 C2C2-CO-like Transcription Factor Family AT4G27310 41.860 2.78e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu08g01609 zf-B_box 2.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01609 - - gmx:100801024 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01609 08 26598613 26602648 Adu08g01609 08 26598613 26602648 ECH
Adu08g01609 08 26598613 26602648 Adu03g01307 03 18950234 18951493 PCT