Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01608 ATGCGAACTACTCTTGTAGTTTTCCTTGTTTCATTGCTGCAATGCACTTCTCAAGTGGTTGTAGCAAAAGATATTATGGAGTCTGGCCAAAACATAACTTCAGAATCTTCATCAAGCTTTCTTGTTTCAGCTGGACAGAGATTTGTACTAGGCTTCTTTCCTCGTCCCGAAAACACATCAGAAAGTTACCTGGGGATATGGTACAACACTAATCAAATACAATACCCTGGAAAACAAACAGTGGTATGGGTTGCCAACAGAGAGATTCCTGTTGTGAGTTCCAATGTTGGAGTCTTTCATATTGCAGATGATGGAAACCTTGTACTAGAAGATGCATCGAGTAAACGACGCTATTGGTCCACATCAATAAGCTCTGCATCCACGGCGACGAACAAAACAAGGAGAGTGCAGCTAATGGATTCTGGGAATCTGGTATTGTTCCATGAAGAAGAAGATGGAGATTACATATGGCAAAGCTTCCAACACCCCACAGACACGTTTCTTCCGGGAATGCAGATGGACATGGATGGCATGGAATTAAGGAGTGGAAACTTCACCTTCAAGATGGTTCGGAAGAAGCGTTATGTCATCTACTTGAATGATCAACAACTCTATTGGGAAAATGATGGACTCAATTCAGATGCACTGAGCCCTGACAAACTCGAATATTTAACTAACTGGACAGACATCGATATCCCTACGTCTTCACGTACGAAAGGTGTGAATCGGACGATGAAACTTTCAGCCACTATGAACATATCCAGCACTGGGACCTGGGAAGCCTTGTATAAGAAATACATGAACACAAGAATTGTGATGAATTCTTCAGGGGAGATACAGTATCTGAAGTGGGAAGAGGAAGACTCTACAGGTGCAGGATGGACGATGTTATGGAGGCAGCCATCGGACAAGTGCCATATATATAATTTTTGCGGCAACTTTAGTAGCTGCGACATTGCAGATGATTCGAGGATCTGCAAATGTTTACCAGGGTTTAAGGAGAATCAGATTCAGAGCCATGAGGGAGGGTCCAGATTCCCAGGATGTAACAGAAGTACACTATCACTGTATGACAGCAGAGGCATGATGTTCATTAACTTGACCATGGTGAGAGTGACCGCACCAGACCTCAAATCCCTCGCAGAAAGCGAAGATGAATGCCGGATTTCGTGCCTTAACATGTATCTTCCCCGGTGCCAAGCTTATTCGTATAATGGCTCTGTTTCAGATTATGATCGTCTTCCTCTCACATGTGGAATTTGGACACAGGATTTAACTACTCTTCAAGTGGTCCAAGATGATGGTGCTGCTACTGCTTCTCTTTCTGTTCTGGTCAACCGTTCAGATATAGCACCAAAGGCAAAATCATGTGAGCCTTGTGGTATATACGTAATTCCTTATCCCCTAAGCACTGGACCAAGCTGTGGGGATGCCACCTACAACAAGTTCATCTGCAACAACTCAACAGGGCAGCTTAACTTCACAATCTCCGGTGGAGAATCGTACCGAGTTACTTGGATAGACCAAAATACCAGAAGGTTTTACATTCAAACCAGCAATTCTTATCGCTGTGATTCCAGCAGTCAAAATAGAGTCCCTGATCCTCCCTTTAATGTCACCAACTGGTGCTACGGAGCAGATGAAATTGAGGTCAGTTGGGATCCAGCGCCAGAACCCCCCTGTAATCACCTCGCAGACTGCAATGATTGGCCTCATTCAACATGCCGACACAAATTTCATCCAGGGGAAAAGAGGTGCTTTTGCCATTCAAAATATCACTGGGATGCCTCAACTCTTACTTGTACTCAAGGAGAGGAATCAAAAAACCACAAATTGCTATTGGTTGTAACTCTTACCGTCATGCTTTTGCTAGCATTTCCAGTGATATTTGCATATGTATGGAGAATCAAGACAAACCCCAAGATTGACAGGGCGAACATTCTAATACAGGAGAGCTTGCATGATAGTGAAAGACAAGTCAAAGGTTTGATAGGCTTGGGAGGTTTAGAAGACAAACACAGTGAAAGCATTGCAGTGCCTTTTTATACTTACAGAAGCATTGTAGCAGCTACTGATAATTTCTCTGAGTCAAACAAGCTTGGAAGAGGAGGTTATGGACCAGTCTACAAGGGAAGGTTTCCCGGAGGCCAAGATATTGCTGTAAAAAGGCTTTCAAGTGTTTCAACACAAGGCTTAGAGGAATTCAAAAATGAGATTGTTTTGATTGCCAAACTCCAACATCGGAACCTTGTTAGACTCAGAGGCTATTGCATAAAGGGAGATGAGAAGATTTTACTTTATGAATACATGCCGAACAAGAGCTTGGACTCTTTCATCTTTGACCGTTCAAGAACTTTACTCCTTGAATGGCCAATGCGGTTTGACATAATCCTAGGCATTGCACGAGGATTGCTTTATCTTCACCAAGACTCTCAAAGAGAGTTGTGGGAACCTACGGATATATGGCACCAGAATATGCTTTGGACGGGTATTTTTCAATCAAGTCCGATGTTTTCAGCTTTGGTGTAG 2529 0.4314 MRTTLVVFLVSLLQCTSQVVVAKDIMESGQNITSESSSSFLVSAGQRFVLGFFPRPENTSESYLGIWYNTNQIQYPGKQTVVWVANREIPVVSSNVGVFHIADDGNLVLEDASSKRRYWSTSISSASTATNKTRRVQLMDSGNLVLFHEEEDGDYIWQSFQHPTDTFLPGMQMDMDGMELRSGNFTFKMVRKKRYVIYLNDQQLYWENDGLNSDALSPDKLEYLTNWTDIDIPTSSRTKGVNRTMKLSATMNISSTGTWEALYKKYMNTRIVMNSSGEIQYLKWEEEDSTGAGWTMLWRQPSDKCHIYNFCGNFSSCDIADDSRICKCLPGFKENQIQSHEGGSRFPGCNRSTLSLYDSRGMMFINLTMVRVTAPDLKSLAESEDECRISCLNMYLPRCQAYSYNGSVSDYDRLPLTCGIWTQDLTTLQVVQDDGAATASLSVLVNRSDIAPKAKSCEPCGIYVIPYPLSTGPSCGDATYNKFICNNSTGQLNFTISGGESYRVTWIDQNTRRFYIQTSNSYRCDSSSQNRVPDPPFNVTNWCYGADEIEVSWDPAPEPPCNHLADCNDWPHSTCRHKFHPGEKRCFCHSKYHWDASTLTCTQGEESKNHKLLLVVTLTVMLLLAFPVIFAYVWRIKTNPKIDRANILIQESLHDSERQVKGLIGLGGLEDKHSESIAVPFYTYRSIVAATDNFSESNKLGRGGYGPVYKGRFPGGQDIAVKRLSSVSTQGLEEFKNEIVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRSRTLLLEWPMRFDIILGIARGLLYLHQDSQRELWEPTDIWHQNMLWTGIFQSSPMFSALV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01608 842 Pfam Protein tyrosine and serine/threonine kinase 697 810 IPR001245 GO:0004672|GO:0006468
Adu08g01608 842 Pfam S-locus glycoprotein domain 249 335 IPR000858 GO:0048544
Adu08g01608 842 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 812 - -
Adu08g01608 842 ProSiteProfiles Bulb-type lectin domain profile. 33 159 IPR001480 -
Adu08g01608 842 Pfam D-mannose binding lectin 80 177 IPR001480 -
Adu08g01608 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 209 IPR036426 -
Adu08g01608 842 CDD B_lectin 40 163 IPR001480 -
Adu08g01608 842 PIRSF SRK 1 465 IPR024171 GO:0004674
Adu08g01608 842 PIRSF SRK 561 824 IPR024171 GO:0004674
Adu08g01608 842 SUPERFAMILY Protein kinase-like (PK-like) 674 811 IPR011009 -
Adu08g01608 842 Gene3D Transferase(Phosphotransferase) domain 1 679 824 - -
Adu08g01608 842 SMART blect_4 23 163 IPR001480 -
Adu08g01608 842 ProSiteProfiles Protein kinase domain profile. 694 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01608 842 Gene3D - 17 161 IPR036426 -
Adu08g01608 842 ProSiteProfiles PAN/Apple domain profile. 349 443 IPR003609 -
Adu08g01608 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01608 Adu-Chr8 26584990 26589023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01608 533 812 Receptor kinase-like Gene Family AT4G21410 39.286 1.75e-50 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01608 PK_Tyr_Ser-Thr 3.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01608 - - ahf:112705270 1661.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01608 08 26584990 26589023 Adu08g01608 08 26584990 26589023 ECH
Adu08g01608 08 26584990 26589023 Adu03g01305 03 18901712 18906174 PCT