Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01588 ATGGACATAGATTCTTCAGGAGGCACATCCAATTGGCTCTACGATTATGGCTTTGATAACATCTCTGTGGCTGACTTCATGGCTCCAGACTCTGCTGCTTTCACCTGGCTGCCTCAACCTCAGCCTCACACCAATTTCAAGCCTCCTTCTTCCAATATCAGCTTGGAAATGGAATACTCAGTGGATTCAATTGTGCTGGAAGGTGGCCCTTCAAAACGGTTGAGGACTGAATCATGTGCATCTGGAACCAAGGCATGTCGAGAGAAATTGCGAAGGGACAAACTGAATGAGAGGCATGCTATTATTTTAAATTTGTTTCTGGAACTGAGTTCCATCTTGGAGCCTGGTAGCATGCAGCCCAAAACCGACAAGGTTGCCATATTAAGTGATGCCGTCCGAGTCGTAAACCAATTAAGAGATGAAGCAGAGAAGCTGAAGGAAATGAATGATGAAATGCTTGAAAAAATTAAAGAGCTCAAGGCTGAGAAGAATGAGCTTCGGGATGAGAAAAATAGGCTCAAGGTAGAGAAAGAGAAGTTGGAGCAGCAGTTCAAGATGACAAATGTTCAGCCAAGCTTCCTCCATCATGCTCCGGCGGCCACGAAAGCGCACGGTGCTAGCCAAAAGCTGATACCCTTCATAGGTTACCCTGGCATAGCCATGTGGCAGTTTATGCCCCCAGCTGCAGTTGATACATCAAAGGATCATCTCCTTCGTCCACCAGTGGCATAA 732 0.4631 MDIDSSGGTSNWLYDYGFDNISVADFMAPDSAAFTWLPQPQPHTNFKPPSSNISLEMEYSVDSIVLEGGPSKRLRTESCASGTKACREKLRRDKLNERHAIILNLFLELSSILEPGSMQPKTDKVAILSDAVRVVNQLRDEAEKLKEMNDEMLEKIKELKAEKNELRDEKNRLKVEKEKLEQQFKMTNVQPSFLHHAPAATKAHGASQKLIPFIGYPGIAMWQFMPPAAVDTSKDHLLRPPVA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01588 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 138 IPR011598 GO:0046983
Adu08g01588 243 Coils Coil 128 190 - -
Adu08g01588 243 Gene3D - 81 167 IPR036638 GO:0046983
Adu08g01588 243 PANTHER BHLH TRANSCRIPTION FACTOR 1 243 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Adu08g01588 243 Pfam Helix-loop-helix DNA-binding domain 83 138 IPR011598 GO:0046983
Adu08g01588 243 CDD bHLH_AtILR3_like 84 167 - -
Adu08g01588 243 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 243 - -
Adu08g01588 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 152 IPR036638 GO:0046983
Adu08g01588 243 SMART finulus 85 144 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01588 Adu-Chr8 26304109 26305788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01588 64 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51070 58.919 3.55e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g01588 HLH 7.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01588 - - aip:107613798 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01588 08 26304109 26305788 Adu08g01588 08 26304109 26305788 ECH