Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01582 ATGGAACCCCTATGTGAATTTTGTGGGGTTGTAAGAGCTGTGGTGTATTGCAAGTCAGATTCTGCGCGCCTATGCCTTAACTGTGATGCATCTGTGCACTCTTCCAATCCCCTGTCAAGCCGGCACGCGCGCTCTCTTCTCTGTGATCTCTGCTATTGCCATGCAGCTGTTGTTTGTTGTGTAGATCATAACATGTGTGTGTGTGAAGCCTGCGAATGGAAGCAGAATGAGTGCTTATTGAGGGGACACGGCCGCCTGCTGTTGAAGTTCTATACCGGTTGTCCCTCTTTTGAGGACTTGTCTAGGCTTTGGTCCTTTGTGTTTGATGCTAACTCCTCATGTGGTGGTGGTTTGCAACCAATTAGTACACTGTGTGTGGAAAAACCTGATAATGATGATGGTTTATTTGATTTGGTGAGTGACAAGTTGAATGAGATACAACCGTGCTTCAAATTCGAGCCTTGGACGGATCTGTCTCCCATGATTCCATCAAATCAAGATACCATGCAATTCTACAAAGATCAAGCACTTTTTCCCCCTCTAGAATCAAACCAGCCAAAGGGATGTTCTAATTTCAACTATCTTGGAATCGATGAAGGAAATGGTTTATGTGAAGGTCTAACTGTGGATGGTGTTATTCAGTTAAACTTTGAAAATGCTGATGAATTAGACTGTGTATTAATGGATAATAACATATCAGTGACAGAATCTAAATGTCCTTCTGCGGATTCCATTGAGGCATCATCATCAGTCCAACAAGATTTTGTAACCTTTCAATCTCCGAGCATGATGCCGACCTTCCACAGTAATGTGAATTGTGCTCTTGTGAGTCCTATTTACAACAGAGACATGAAACTTGGATTCCCTCAGGATCAAGTTCATTCCAGCATATCGATGGAATTATCCAACATTGCTGGAGACAGTAGTGCTACTGATCTAGCTTGTGAGTTGTCCAATGAGATACAATGCCCAGAGAGAAGGGCCAAAGCTAAAATGAGATACAATGAGAAAAAGAAAACCCAAATGTTTGGCAAACAAATAAGATATGCATCTAAGAAAGCGAGGGCCGAGGCAAGAAAACGAGTGAAAGGTAGATTTGTTAAGACAGGAAGAAGAATATGA 1122 0.4225 MEPLCEFCGVVRAVVYCKSDSARLCLNCDASVHSSNPLSSRHARSLLCDLCYCHAAVVCCVDHNMCVCEACEWKQNECLLRGHGRLLLKFYTGCPSFEDLSRLWSFVFDANSSCGGGLQPISTLCVEKPDNDDGLFDLVSDKLNEIQPCFKFEPWTDLSPMIPSNQDTMQFYKDQALFPPLESNQPKGCSNFNYLGIDEGNGLCEGLTVDGVIQLNFENADELDCVLMDNNISVTESKCPSADSIEASSSVQQDFVTFQSPSMMPTFHSNVNCALVSPIYNRDMKLGFPQDQVHSSISMELSNIAGDSSATDLACELSNEIQCPERRAKAKMRYNEKKKTQMFGKQIRYASKKARAEARKRVKGRFVKTGRRI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01582 373 CDD Bbox1_BBX-like 4 47 - -
Adu08g01582 373 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 2 371 - -
Adu08g01582 373 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Adu08g01582 373 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 371 - -
Adu08g01582 373 SMART bboxneu5 1 47 IPR000315 GO:0008270
Adu08g01582 373 Pfam CCT motif 327 369 IPR010402 GO:0005515
Adu08g01582 373 ProSiteProfiles CCT domain profile. 327 369 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01582 Adu-Chr8 26263594 26265003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01582 1 370 C2C2-CO-like Transcription Factor Family AT3G21880 35.250 1.93e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu08g01582 CCT 1.6e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01582 - - adu:107461934 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01582 08 26263594 26265003 Adu08g01582 08 26263594 26265003 ECH