Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01579 ATGGAGGAACCCATTTGTCCAATCGATTCCAGTTGCCAAACTCAAGTCTCTGCTCTTCTCTCTCCTCCCTCCACTCTTCAACTTCAGGAATATTATAATACCCTTTTGTCTGCAAGGCACTACAGTTCCATCACTATTGATTGTTTTGTATGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAGCTTCAAATTGGAAGGAGGCTTTACCTCCAGGGATTAAGGGATTCTGAGAGTCATGGATGTGATGTCGGAAGCTCTTCGAGCTTGTCAAAAAACTTCCATGAGATGGATTCATCATCTGAAGATGAGGATCAGGGAACTCATCAATGTGGTTCCGGCAGTTCCAAAGATAAAATTCCTCTTCCTGAAGGTGTTGTGGAATCTTTAATGAATGGCCAACTGAATTTGCCTTTCTCTAAGGAGTTCTCGTTGCCGCCGGCGGTTCCATGCCTGGGCGGCTGTGGAGAAGCTTACTATTGCAGCACATCATGTGCAGAGGCTGACTGGGAATCTTCGCATTCTTTACTCTGCACTGGCGAGAGGTCTGATCCCGCTCATAGGGAGGCACTTCTTAAATTCAATAAACATGCTAATGAAACAAATGATATATTCATCCTTGCCGCAAAGGCTATTTGTTTTACCATATTAAGATACCGCAAGTTAAAAGCAAACTGTCATGAAGGGAAAATGAAATATGATACTTCTGGTGATTCAAACAGCTATAATGCCTCTCTTCTTTTGGAAGCTTGGAGGCCTATATCAATGGGACACAAGAGAAGGTGGTGGGATTGTGTTGCATTGCCAGATGATATTGATTCTTCAGATGAAGATTCGTTCAGGATGCAATTAAAAGAATTGGCATTCAAGTCTCTCCAACTTCTTAAGAAAGCTATATTTGACAAAGAGTGTGAGCCATTATTCTCCCTTGATATCTATGGACACATCATTGGCATGTTCGAACAGAATAATCTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGAAAAATCCTAATAAGGAAGAAGCTGAGAAAATTACACAACCAATTTTAGATGCTCTTGGTGAAGACTATTCTGTTTGTTGCCAAGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTAGTCCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAGAAGAGATAACCATCTCATATGTTGATGAAGACCTTCCTTTTGAAGAGAGACAAGCATCCCTTGCAGACTATGGTTTTAGATGCAGGTGTCCAAAATGCATTGAAGAAGAGCCATAA 1359 0.4143 MEEPICPIDSSCQTQVSALLSPPSTLQLQEYYNTLLSARHYSSITIDCFVCSFCFRFIGSIELQIGRRLYLQGLRDSESHGCDVGSSSSLSKNFHEMDSSSEDEDQGTHQCGSGSSKDKIPLPEGVVESLMNGQLNLPFSKEFSLPPAVPCLGGCGEAYYCSTSCAEADWESSHSLLCTGERSDPAHREALLKFNKHANETNDIFILAAKAICFTILRYRKLKANCHEGKMKYDTSGDSNSYNASLLLEAWRPISMGHKRRWWDCVALPDDIDSSDEDSFRMQLKELAFKSLQLLKKAIFDKECEPLFSLDIYGHIIGMFEQNNLDLVVASPVEDYFLYIDDLKNPNKEEAEKITQPILDALGEDYSVCCQGTAFFPLQSCMNHSCSPNAKAFKRDEDRDGQATIIAVRPIRKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEEP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01579 452 Gene3D - 96 183 - -
Adu08g01579 452 CDD SET_SMYD 370 447 - -
Adu08g01579 452 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 35 451 IPR044237 GO:0008168
Adu08g01579 452 ProSiteProfiles SET domain profile. 238 422 IPR001214 GO:0005515
Adu08g01579 452 MobiDBLite consensus disorder prediction 81 95 - -
Adu08g01579 452 Pfam MYND finger 150 178 IPR002893 -
Adu08g01579 452 MobiDBLite consensus disorder prediction 80 120 - -
Adu08g01579 452 Gene3D SET domain 343 451 IPR046341 -
Adu08g01579 452 SUPERFAMILY HIT/MYND zinc finger-like 153 179 - -
Adu08g01579 452 Pfam SET domain 358 421 IPR001214 GO:0005515
Adu08g01579 452 SUPERFAMILY SET domain 313 447 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01579 Adu-Chr8 26191464 26194774 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu08g01579 SET 3.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01579 - - aip:107613919 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01579 08 26191464 26194774 Adu08g01579 08 26191464 26194774 ECH