Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01572 ATGAACGACCTTCTTACTGATTCGTTTGCTGATGAAGGTAATCATGGTCAGCCTTCTAGACAAGGTGATATTGAAATGGGAATGCAGGTTCAGAGAAGCAACTCTGATCTGGGAATGGAAGCTTTTAATAAGCAGATCCATGAGGTCGACAAACAAATCGATAAGCTCTCTGGGCTACTTCAAAAGCTAAAGGAAGCTAATGAAGAATCAAAAGCCGTTACAAAAGCATCTGCTATGAAAGCTATCAAGAAGAGAATGGAGAAGGATATTGATGAAGTTGGAAAGATTGCACATGGTGTCAAAACAAAAATAGAAGCTATAAACAGAGATAACTTAAACAACAGAAAAAAGCCAGGTTGTGAGAAGGGAACGGGTATTGATAGAGCGAGGATGAATATGACAAATGCCTTAACTAAAAGGTTCAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTTGAGAGAAGAGTTATTACAGTCACTGGAACTAGGCCAGATGATGAGACAATTGATCACCTGATTGAAACTGGAAATAGTGAACAAATCTTCCAGAAGGCAATTTTAGAAGCAGGACGAGGACAGGTTGTAAGCACAGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATTGAGAAAAAGCTTCTTGATTTGCACCAGATTTATCTCGACATGGCAGTCTTGGTTGATGCTCAGGGAGAGATTTTAGACAACATCGAAAGCCAGGTGACAAACGCAACTGATCATGTTAGATTGGGAAACGATGCTCTTCAAACTGCAAAGATTTATCAAAAGAGGTCAAGAAAATGCATGATCATTGCTGTTATACTGGTCTTGATCATCGCCGCCATTATCGTGATCCCCATTTTGAAAACAAGGAAGAAGTGA 921 0.3931 MNDLLTDSFADEGNHGQPSRQGDIEMGMQVQRSNSDLGMEAFNKQIHEVDKQIDKLSGLLQKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKTKIEAINRDNLNNRKKPGCEKGTGIDRARMNMTNALTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQKAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVTNATDHVRLGNDALQTAKIYQKRSRKCMIIAVILVLIIAAIIVIPILKTRKK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01572 306 Gene3D - 34 163 - -
Adu08g01572 306 MobiDBLite consensus disorder prediction 1 25 - -
Adu08g01572 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
Adu08g01572 306 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 12 301 - -
Adu08g01572 306 Pfam SNARE domain 245 297 IPR000727 -
Adu08g01572 306 Pfam Syntaxin 42 244 IPR006011 GO:0016020
Adu08g01572 306 PANTHER SYNTAXIN 12 301 IPR045242 -
Adu08g01572 306 SMART tSNARE_6 204 271 IPR000727 -
Adu08g01572 306 CDD SNARE_syntaxin1-like 208 270 - -
Adu08g01572 306 SMART SynN_4 34 160 IPR006011 GO:0016020
Adu08g01572 306 Gene3D - 203 302 - -
Adu08g01572 306 Coils Coil 46 76 - -
Adu08g01572 306 CDD SynN 39 196 IPR006011 GO:0016020
Adu08g01572 306 SUPERFAMILY t-snare proteins 37 264 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01572 Adu-Chr8 26146298 26154098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01572 1 302 SNARE and Associated Proteins AT3G03800 59.934 3.22e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01572 K08486 - gmx:100800991 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01572 08 26146298 26154098 Adu08g01572 08 26146298 26154098 ECH