Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01567 ATGCCAGCCGGTATTATGATTCCGGCGAGAAACATGATGTCATCGATGATCGGAAGGACCAACAATGGAAACAGCCTTGGGGGTGGGTTTGGATCTTCGTCTTCCTCTGGACTCTCTCTTGGCCAGATTGAGAACCACAACAAGGGTTCGGAGACACATCACCAAAGATCCATGGATATGTTTCAAGCCAACATGATGGAAGGTGGTCAATTGCACCACCACGGCCTCGAGATGGGTCAGAACACGCCGGAGAGCGACGTCCCTAGAATCCGAGAGGACGAGTTCGACAGCGCCACCAAGTCCGGCAGCGAGAACCAAGAAGGTGGCGCCTCCGGCGAGGACCAAGACCCCCGCCCTAACAAGAAGAAGCGTTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCATTCTTTAAGGAGTGTCCGCACCCAGATGACAAGCAAAGGAAGGAACTGAGCCGTGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTTTGGTTCCAGAACAAGCGCACTCAAATGAAGACGCAACATGAGAGGCACGAGAACACGCAGCTAAGGACAGAGAACGAGAAGCTGAGAGCGGATAACATGAGGTATAGGGAGGCTCTTAGCAATGCCTCTTGCCCCAACTGTGGTGGACCAACCGCCATTGGAGAAATGTCTTTTGATGAGCATCACTTGAGGCTTGAAAATGCCAGGCTAAGGGAAGAGATTGATCGGATTTCTGCCATTGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTACCCACTCCTTTCATCATCCTCAGTTCCAGCACGTCCGCTAGAACTCGGCATTGGTGGTTTCGGTGGGCAAGCGGGCATGGGTGGTGGCGACATGTACGGAGGAGGTGGAGCCGGAGATCTTCTGAGGCCAATAAGTGGGCCCACTGAAGCAGACAAGCCAATGATAATAGAGCTGGCCGTAGCGGCCATGGAGGAGCTGATTGGGATGGCACAGATGGGTGAGCCTCTTTGGTTGACCACACTTGATGGTGCCACCACTGTGCTTAACGAGGATGAATATGTCAGATCTTTCCCCCGTGGAATTGGACCCAAACCTAATGGATTCAAATGTGAGGCTTCACGAGAAACCGCTGTTGTCATCATGAACCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCGACAGTTTTCTCTGGAATAGTTTCAAGAGCGGTGACTCTAGAAGTTCTATCAACAGGGGTAGCAGGAAACTATAACGGTGCCTTGCAAGTGATGACGGCGGAGTTACAAGTGCCTTCGCCGCTGGTGCCAACAAGAGAGAGCTATTTCGTAAGGTATTGTAAGCAGCACGCGGACGGCACGTGGGCAGTGGTGGACGTGTCGTTGGACAATTTGCGGCCTAGTCCTTCGGCCAGGTGCAGGAGAAGGCCTTCTGGTTGCTTGATTCAAGAAATGCCCAACGGCTACTCCAAGGTCATATGGGTTGAGCACGTTGAAGTTGATGACAGAGGCGTTCATAGTCTCTATAAGCAGCTTGTTAGCTCTGGTCACGCCTTCGGTGCCAAACGCTGGATTGCAACCTTGGATCGCCAGTGTGAAAGGCTCGCTAGTGCCATGGCAACTAACATTCCCACCGTTGATGTTGGAGTGATAACAAATCAAGAAGGGAGGAAGAGCATGCTGAAACTGGCGGAGAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGTGCTTCAACGGCGCACACGTGGACAACGCTTTCTGGAACGGGTGCGGATGACGTCAGAGTCATGACACGTAAGAGTGTGGATGACCCTGGAAGGCCACCTGGCATTGTTCTCAGTGCTGCTACTTCTTTCTGGCTCCCAGTACCTCCTAAAAGGGTCTTTGAATTCCTCCGTGACGAGAATTCCAGAAGCGAGTGGGACATCCTTTCCAATGGTGGAGTTGTTCAAGAAATGGCACATATTGCTAATGGAAGAGATACTGGAAATTGTGTCTCTCTCCTTCGAGTCAACAGTGCGAATTCAAGCCAGAGTAACATGTTGATATTGCAAGAGAGTTGCACGGATTCAACTGGGTCATTTGTGATCTATGCCCCAGTGGACATTGTTGCCATGAATGTGGTTCTGAATGGAGGAGATCCTGACTATGTGGCGCTTCTTCCTTCTGGCTTCGCTATTCTTCCGGACGGGACAACGCCGGACGGAGGCAGCGAAGCCGGTGGACATGGTGGTTCTCTCTTAACTGTTGCGTTTCAAATACTGGTTGATTCCGTTCCAACCGCCAAGCTGCTTCTTTATCTGGAGAAGCTCCTTCATAAAGAAAACCTATGTTGTATTAGAAGAAGGAAAATGGGGGGTGCATTGCATTTTGGAGAAATGATGGAGGAAGGTGTATGTTTGGGAAGTTCGGCTTATACACAAAACAAGCTAAGGAAATGGGGGGAGAAGTCAAGAGCGCACCTTATTGCATGA 2481 0.5071 MPAGIMIPARNMMSSMIGRTNNGNSLGGGFGSSSSSGLSLGQIENHNKGSETHHQRSMDMFQANMMEGGQLHHHGLEMGQNTPESDVPRIREDEFDSATKSGSENQEGGASGEDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSSSSVPARPLELGIGGFGGQAGMGGGDMYGGGGAGDLLRPISGPTEADKPMIIELAVAAMEELIGMAQMGEPLWLTTLDGATTVLNEDEYVRSFPRGIGPKPNGFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAVTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHSLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTPDGGSEAGGHGGSLLTVAFQILVDSVPTAKLLLYLEKLLHKENLCCIRRRKMGGALHFGEMMEEGVCLGSSAYTQNKLRKWGEKSRAHLIA 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01567 826 MobiDBLite consensus disorder prediction 95 130 - -
Adu08g01567 826 Pfam Homeodomain 122 177 IPR001356 GO:0003677
Adu08g01567 826 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 76 770 IPR042160 -
Adu08g01567 826 Gene3D - 109 196 - -
Adu08g01567 826 SMART START_1 316 536 IPR002913 GO:0008289
Adu08g01567 826 SUPERFAMILY Bet v1-like 555 763 - -
Adu08g01567 826 Pfam START domain 317 536 IPR002913 GO:0008289
Adu08g01567 826 SUPERFAMILY Homeodomain-like 111 179 IPR009057 -
Adu08g01567 826 CDD homeodomain 122 180 IPR001356 GO:0003677
Adu08g01567 826 CDD START_ArGLABRA2_like 311 535 - -
Adu08g01567 826 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 76 770 - -
Adu08g01567 826 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Adu08g01567 826 SMART HOX_1 120 183 IPR001356 GO:0003677
Adu08g01567 826 SUPERFAMILY Bet v1-like 307 538 - -
Adu08g01567 826 MobiDBLite consensus disorder prediction 18 46 - -
Adu08g01567 826 Gene3D - 361 533 IPR023393 -
Adu08g01567 826 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
Adu08g01567 826 Coils Coil 185 205 - -
Adu08g01567 826 ProSiteProfiles START domain profile. 307 539 IPR002913 GO:0008289
Adu08g01567 826 MobiDBLite consensus disorder prediction 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01567 Adu-Chr8 26076487 26081553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01567 60 786 Homeobox Transcription Factor Family AT1G05230 77.080 0.0 1132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu08g01567 START 3.5e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01567 K09338 - gmx:100809556 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01567 08 26076487 26081553 Adu08g01567 08 26076487 26081553 ECH