Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01565 ATGGAGCTGCTTTCAATCACAAGGCATGGCAACATGATGCTTCTGTTGCTCTTGGTTTTATGGTCCTGCAGGTGGATTCCACTGCAAGTTTCGGGTAGAAAAGGAACTACCTTTGCAGATTCTACTGTTGATCCTAAACCAAATGTTTTGAGAATTGGAGCACTCTTTACTGTGAACTCTTTGATGGAGAATGATGTAGTTGCTGTAATTGGTCCACAATCATCTGGAATAGCTCATCTCATCTCTAATGTGGTTAATGAACTCCATGTTCCTCTGCTCTCATTCGCGACAGACCCTTCTCTATCATCACTCCAGTATCCATATTTCATCCGCACCATGCCAAGTGACTGTTTCCAGATGTATGCAATTGCTGACTTGGTTGATTATTATCAGTGGAGGGAGGTAATAGCTATTTATGTAGATGATGACAATGGAAGAAATGGAATTTCAGTGTTAGGCAATGCGCTTGCTAAGAAGCGTGCCAAGATATCTTATAAGGCTGCATTTCCTCCTGGAGCTGCAATGAGTGACATCAGTGACTTGTTGAATCATGTGAACTTGATGGAATCTCGCATCTATGTGCTGCATGTTAATCCTGATTCTGGCTTGTCAATTTTTGATATTGCCAACAAGCTTGGAATGATTAGTAGTGGCTATATGTGGATTGCAACGGATTGGCTTCCTTCTGTGCTGGATTCTATGGAGCCGGCAGTTAATGATGACACAACCAACCTCCTGCAAGGTGTTGTTGCTTTGAGGCATCACACACCTGATACTGATTTTAAGAAGAGTTTCATCTCCCAGTTGAAGAGCCGATACAAAAATTTAACTGCACGCATAAACTCTTATGCACTATATGGATATGATTCTGTTTGGTTAGCAGCACATTTCTCGATGCTTTTCTCAATGAAGGTGGAGACATATCTTTCTCCTTTGACACTCAGTTGCATGGCACAAATGCAAGCATGTTCAACTTTTCTTTGCTTCGCGTGTTTGATCAAGTGCCTAACCGGATACGCTACACCGAGATTGTTTCTAAGGAGAAGAGGCTATTGCATTGATGTCTTTGAAGCAGCAATCAACTTGTTACCTTATCCTGTTCCGCAACAATATATACTCTATGGAGATGGTGATAGTAATCCAGATTACAGTGACCTTGTGAATCAGGTTGCACAAAATAAATTTGATGTAGTTGTTGCAGATATTACAATTGTAACAAGCAGAGTAAAGATTGTGGATTTTACTCAGCCTTTCATGGAATCAGGGCTGGTTGTTCTTGTAGCTGTTAATGAGAACAAGTCTAGCCCTTGGTCTTTTCTCCATCCATTCACTGCTGAAATGTGGTTAGTTATTGGTGCATTATTTCTCTTTGTGGGATTCTTCGTGTGGATTCTTGAGCACCGGCACAACGAGGAGTTTCGTGGTTCGCCAAGTGAACAAGTTGTAACTGTCTGTTGGATTAGTTTCTCAACAATGTTCTTCTCACACAAAGAAAAACCTGTGAGTGCTCTTGGAAAATTGGTACTAATCATATGGCTTTGGGTGGTTTTGATTATCAATTCAAACTATACAGCTAGCCTAACATCCATCATCGTAGGAATCGATAGCTTGATCTCTAGTACTCAACCAATTGGAATTCAAGAAGGCTCATTCGCGAGAAAGTATTTGATCAATGAACTCAAAATATCACCATCAAGGATAGTTACACTGAAAGACCAAGATGCATGTCTTAATGCCCTTCAGCGCAGACCGAAAGATGGAGGTGTTATGGCCATTGTTGATGAGCTTCCTTATATTCAGCTTTTCATGTCCAATACTAACTGTCAGTTCAGGATTGTAGGGCAAGAGTTCACTAAAAGTGGTTGGGGATTTGTAAGCATTTCAGGGGGATTCATTCTCCTTTTGTTGATGATTTATCAGCAACAATTCTTCGACTCTCGGAAAATGGGGAGCTGGAAAAGATCCATGACAAATGGCTTTCAAACCAGGATTGCGCTATGCAACTCAGATGAGAACTCGAATCAACTCTCACTGAGAAGTTTCTGGGCCTCTTCCTTGTATGTGGCATTGCATGCTTCCTTGCTTTGA 2088 0.4119 MELLSITRHGNMMLLLLLVLWSCRWIPLQVSGRKGTTFADSTVDPKPNVLRIGALFTVNSLMENDVVAVIGPQSSGIAHLISNVVNELHVPLLSFATDPSLSSLQYPYFIRTMPSDCFQMYAIADLVDYYQWREVIAIYVDDDNGRNGISVLGNALAKKRAKISYKAAFPPGAAMSDISDLLNHVNLMESRIYVLHVNPDSGLSIFDIANKLGMISSGYMWIATDWLPSVLDSMEPAVNDDTTNLLQGVVALRHHTPDTDFKKSFISQLKSRYKNLTARINSYALYGYDSVWLAAHFSMLFSMKVETYLSPLTLSCMAQMQACSTFLCFACLIKCLTGYATPRLFLRRRGYCIDVFEAAINLLPYPVPQQYILYGDGDSNPDYSDLVNQVAQNKFDVVVADITIVTSRVKIVDFTQPFMESGLVVLVAVNENKSSPWSFLHPFTAEMWLVIGALFLFVGFFVWILEHRHNEEFRGSPSEQVVTVCWISFSTMFFSHKEKPVSALGKLVLIIWLWVVLIINSNYTASLTSIIVGIDSLISSTQPIGIQEGSFARKYLINELKISPSRIVTLKDQDACLNALQRRPKDGGVMAIVDELPYIQLFMSNTNCQFRIVGQEFTKSGWGFVSISGGFILLLLMIYQQQFFDSRKMGSWKRSMTNGFQTRIALCNSDENSNQLSLRSFWASSLYVALHASLL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01565 695 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 349 684 - -
Adu08g01565 695 Pfam Ligand-gated ion channel 445 532 IPR001320 GO:0015276|GO:0016020
Adu08g01565 695 PANTHER GLUTAMATE RECEPTOR 3.4 61 296 - -
Adu08g01565 695 PANTHER GLUTAMATE RECEPTOR 3.4 349 684 - -
Adu08g01565 695 Gene3D - 435 555 - -
Adu08g01565 695 Pfam Bacterial extracellular solute-binding proteins, family 3 382 623 IPR001638 -
Adu08g01565 695 Gene3D - 118 294 - -
Adu08g01565 695 Pfam Receptor family ligand binding region 55 296 IPR001828 -
Adu08g01565 695 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 61 296 - -
Adu08g01565 695 SUPERFAMILY Periplasmic binding protein-like II 348 625 - -
Adu08g01565 695 SMART GluR_14 332 685 IPR001320 GO:0015276|GO:0016020
Adu08g01565 695 Gene3D - 335 434 - -
Adu08g01565 695 SUPERFAMILY Periplasmic binding protein-like I 48 296 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01565 Adu-Chr8 26051945 26055487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01565 349 625 Ion Channels AT1G05200 68.182 1.96e-134 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01565 K05387 - gmx:100802782 407.142