Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01547 ATGATCTCCAATAATAACAAGAACAATGAGGATGGTGAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGAGAGAGGACGCCATACTTATCGAACAGGTAGAGAAGTGTGGCAAAGGTAATTGGAGTTTAATTCGAAAGAATTCTGAGTTGAGGAGAAGTGGCAAAAGTTGTAGGCTTAGATGGTCGAACCATCTAAATCCTGACTTGAAGAAGGGTCCTTTCTCTGAAAAAGAGGAGAAAACCATTGATGATCTTCATGCTAAGTTTGGAAACAAATGGGCTCTAATGGCTACCAAGGTTTCTGGAAGATCAGACAATGACATCAAAAACTTTTGGAACTCAAGAATGAAGAAGCGCCTAAGAGAATATCCTCCACAAATAACGGTTCAACAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAGTGTTGAACTACCTTCAAATATTTCTGCTGCCAATCCTCCACCAAATCATAATCAGAAACAACCTAATCAAAATGATTCTTCTTTTTCTTCTTCTTCTTCTTTCTCTTACACCAATAATAATGCAAGTTTTGTATTGCCATTAACCCATGTGTCTCCTTATTGTAAGAGTAGTGGTTTATTGAATGATGTGGTGATGGAGGGTAATGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAACCATTGTTATTGGTAGGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAGTAAAGAAGAAGAAATAGCCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTGATTTCAACAGAGAAGAATGATAATGGAGGTTGTAACAATAACAAGGAGGCATTGAATAATTCTATGCCACAAATGGACGATGAATTGCTTAGCATACTTAAAAATTGTCCAATATATTCGCCAGTGCGAAAGTGGTACAAAGTTGATGATGATGAGGACTCCCTGATGATGATGGAGATTTGA 1035 0.3836 MISNNNKNNEDGESWRDDLRKGPWTPREDAILIEQVEKCGKGNWSLIRKNSELRRSGKSCRLRWSNHLNPDLKKGPFSEKEEKTIDDLHAKFGNKWALMATKVSGRSDNDIKNFWNSRMKKRLREYPPQITVQQAQHFSSSPFYSVLASCYPKNNLSVELPSNISAANPPPNHNQKQPNQNDSSFSSSSSFSYTNNNASFVLPLTHVSPYCKSSGLLNDVVMEGNALCRKGKSKMDATIVIGREEEELADKRKIIEEPPLPPVGTSKEEEIATIIATQSSSHQLISTEKNDNGGCNNNKEALNNSMPQMDDELLSILKNCPIYSPVRKWYKVDDDEDSLMMMEI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01547 344 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Adu08g01547 344 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Adu08g01547 344 CDD SANT 76 116 IPR001005 -
Adu08g01547 344 MobiDBLite consensus disorder prediction 161 190 - -
Adu08g01547 344 Pfam Myb-like DNA-binding domain 24 83 - -
Adu08g01547 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 123 IPR017930 -
Adu08g01547 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Adu08g01547 344 CDD SANT 23 68 IPR001005 -
Adu08g01547 344 SMART sant 73 121 IPR001005 -
Adu08g01547 344 SMART sant 20 70 IPR001005 -
Adu08g01547 344 Gene3D - 75 141 - -
Adu08g01547 344 Gene3D - 21 73 - -
Adu08g01547 344 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Adu08g01547 344 MobiDBLite consensus disorder prediction 1 22 - -
Adu08g01547 344 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01547 Adu-Chr8 25788244 25791276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01547 19 133 MYB Transcription Factor Family AT2G32460 62.185 5.80e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g01547 Myb_DNA-bind_6 3.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01547 K09422 - ahf:112771967 602.823