Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01546 ATGATCTCCAATAATAACAAGAACAATGAGGATGGTGAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGAGAGAGGACGCCATACTTATCGAGCAGGTAAAGAAGTGTGGCAAAGGTAATTGGAGTTTAATTCGAAAGAATTCTGAGCTGAGGAGAAGTCGCAAAAGTTGTAGGCTTAGATGGTCGAACCATCTAAATCCTGACTTGAAGAAGGGTCCTTTCTCTGAAAAAGAGGAGAAAACCATTGATGATCTTCATGTTAAGTTTGGAAACAAATGGGCTCTAATGGCTACCAAGGTTTCTGGAAGATCAGACAATGACATCAAAAACTTTTGGAACTCAAGAATGAAGAAGCGCCTAAGAAAATATCCTCCACAAATAACGGTTCAACAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAGTGTTGAACTACCTTCAAACATTTCTGCTGCCAATCCTCCACCAAATCATAATCAGAAACAACCTAATCAAAATGATTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTTGCACCAATAATAATGCAAGTTTTGTATTGCCATTAACCCCTGTGTCTCCTTATTGTAAGAGTAATGGTTTATTGAATGATGTGGTGATGGAGTGTAATGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAACCATTGTTATTGGTAAGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAGTAAAGAGCAAGAAACAGCCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTGATTTCAACAGAAAAGAATGATAATGGAGGTTGTAACAATAACAAGGAGGCATTGAATAATTCTATGCCACAAATGGACGATGAATTGCTTAGCATACTTAAAAATTGTCCAATATATTCGCCAATGCGAAAGTGGTACAAAGTTGATGATGATGATGATGGAGATTTGAATCTTGGTAACTTATGGAATATTGATGGATGGTAA 1056 0.3788 MISNNNKNNEDGESWRDDLRKGPWTPREDAILIEQVKKCGKGNWSLIRKNSELRRSRKSCRLRWSNHLNPDLKKGPFSEKEEKTIDDLHVKFGNKWALMATKVSGRSDNDIKNFWNSRMKKRLRKYPPQITVQQAQHFSSSPFYSVLASCYPKNNLSVELPSNISAANPPPNHNQKQPNQNDSSSSSSSSFSCTNNNASFVLPLTPVSPYCKSNGLLNDVVMECNALCRKGKSKMDATIVIGKEEEELADKRKIIEEPPLPPVGTSKEQETATIIATQSSSHQLISTEKNDNGGCNNNKEALNNSMPQMDDELLSILKNCPIYSPMRKWYKVDDDDDGDLNLGNLWNIDGW 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01546 351 Pfam Myb-like DNA-binding domain 24 83 - -
Adu08g01546 351 CDD SANT 76 116 IPR001005 -
Adu08g01546 351 MobiDBLite consensus disorder prediction 161 190 - -
Adu08g01546 351 Gene3D - 21 73 - -
Adu08g01546 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Adu08g01546 351 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Adu08g01546 351 CDD SANT 23 68 IPR001005 -
Adu08g01546 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 123 IPR017930 -
Adu08g01546 351 SMART sant 20 70 IPR001005 -
Adu08g01546 351 SMART sant 73 121 IPR001005 -
Adu08g01546 351 MobiDBLite consensus disorder prediction 1 22 - -
Adu08g01546 351 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 193 - -
Adu08g01546 351 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Adu08g01546 351 Gene3D - 75 141 - -
Adu08g01546 351 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01546 Adu-Chr8 25771681 25774882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01546 19 133 MYB Transcription Factor Family AT2G32460 60.504 3.88e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g01546 Myb_DNA-bind_6 4.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01546 K09422 - ahf:112771967 592.423