Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01545 ATGATCTCCAATATAGATTGGAGAGATGATTATTTGAGAAAGGGGCCTTGGACGCCGAGAGAGGACGCCATACTTATCGAGCAGGTAGAGAAGTGTGGCAAAGGTAATTGGAGTTTAATTCGAAAGAATTCTGAGTTGAGGAGAAGTGGCAAAAATTGTAGGCTTAGATGGTCGAACCATCTAAATCCTGACTTGAAGAAGGGTCCTTTCTCTGAAGAAGAGGAGAAAACCATTTATGATCTTCATGCTAAGTATGGAAACAAATGGGCTCTAATGGCTACCAAGAGAAGAAGAAGACAACTGGAGGCAGTAGAGAAACGCCATCGCACTTCGCTGAGAGTCATCGTTAGTTGTTGTCGAGAAGCACTCAAAGAGAGGAGCTTTTTCATGGGGCAATGCGACTTTGAGGCTGGTGAGTGGTATCGGTGGCTGGTTCCTGGAAGATCAGACAATGACATCAAAAATTTTTGGAACTCAAGAATGAAGAAGCGCCTAAGAGAATATCCTCCACAAATAACGGTTCAACAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAGTGTTGAACTACCTTCAAACATTTCTGCTGCCAATCCTCCACCACATCATAATCAGAAACAACCTAATCGAAATAATTCTTCTTCATTCTCTTGCACCAATAATAATGCAAGTTTTGTATTGCCATTAACCCCTGTGTCTCCTTATTGTAAGAGTAGTGGTTTATTGAATGATGTGGTGATGGAGGGTATTGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAACCATTGTTATTGGTAGGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAGTAAAGAGGAAGAAACAGCCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTAATTTCAACAGAGAAGAATGATAATGGAGGTTGTAACAATAATAAAGAGGCATTGAATAATTCTATGCCACAAATGGACGATGAATTGCTTAGCATACTTAAAAATTGTCCAATATATTCGCCAGTGCGAAAGTGGTACAAAGTTGATGATGATGAGGACTCCCTGATGATGATGATGGAGATTTGA 1149 0.4012 MISNIDWRDDYLRKGPWTPREDAILIEQVEKCGKGNWSLIRKNSELRRSGKNCRLRWSNHLNPDLKKGPFSEEEEKTIYDLHAKYGNKWALMATKRRRRQLEAVEKRHRTSLRVIVSCCREALKERSFFMGQCDFEAGEWYRWLVPGRSDNDIKNFWNSRMKKRLREYPPQITVQQAQHFSSSPFYSVLASCYPKNNLSVELPSNISAANPPPHHNQKQPNRNNSSSFSCTNNNASFVLPLTPVSPYCKSSGLLNDVVMEGIALCRKGKSKMDATIVIGREEEELADKRKIIEEPPLPPVGTSKEEETATIIATQSSSHQLISTEKNDNGGCNNNKEALNNSMPQMDDELLSILKNCPIYSPVRKWYKVDDDEDSLMMMMEI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01545 382 SMART sant 13 63 IPR001005 -
Adu08g01545 382 SMART sant 66 114 IPR001005 -
Adu08g01545 382 MobiDBLite consensus disorder prediction 204 227 - -
Adu08g01545 382 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 11 240 - -
Adu08g01545 382 Pfam Myb-like DNA-binding domain 17 76 - -
Adu08g01545 382 CDD SANT 16 61 IPR001005 -
Adu08g01545 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 91 IPR017930 -
Adu08g01545 382 SUPERFAMILY Homeodomain-like 15 91 IPR009057 -
Adu08g01545 382 SUPERFAMILY Homeodomain-like 67 162 IPR009057 -
Adu08g01545 382 Gene3D - 142 183 - -
Adu08g01545 382 Gene3D - 66 116 - -
Adu08g01545 382 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu08g01545 382 Gene3D - 14 65 - -
Adu08g01545 382 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu08g01545 382 CDD SANT 69 107 IPR001005 -
Adu08g01545 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01545 Adu-Chr8 25730368 25733525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01545 12 175 MYB Transcription Factor Family AT2G32460 44.048 2.24e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g01545 Myb_DNA-bind_6 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01545 K09422 - ahf:112771967 547.354