Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01539 ATGCAAGTGGTGGCTTTGATGCAACAACACAAGCCAGAGGAGGAGGAGGAGAAGAAGCAAGACGCAGCGCCAAGACAGTTCATGGATCTTGGATTGGCCACTAACGGTGCTGAGACGGGGGAGGAGGCTTCGCTTTCTTCGTCGGAGAGGTCGAAGTCTCCAGAGAGGAAGAATGGAAGCAGTGATGATCACGAAAAGAATAGCAGAGAGGATAGTCCCTTGGCTCCAAGAAATGTTGATCAAGCTGAAGCCACTATGAGAAAAGCTAGAGTCTCTGTTAGAGCTAGATCAGAGGCTCCAATGATGACGGATGGATGCCAATGGAGGAAATATGGGCAGAAGATGGCAAAAGGAAACCCATGTCCAAGAGCATACTACAGATGCACCATGGCTGCAGGTTGCCCTGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACAGAACAATACTAGTAACAACATATGAAGGGAATCACAACCACCCTCTGCCACCAGCAGCAATGGCAATGGCACAAACAACATCTTCAGCAGCAAGAATGCTTCTCTCGGGATCAATGTCAAGCAGTGATGGCCTTATGAATGCTAACTTTCTAACAAGGACACTCCTTCCTTGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCACCATTCCCAACTGTCACTTTGGATCTCACTCACTCCCCTAACCCTTTGCAATTCCCAAACCACCAAAACCACTTCCAATTACCATTCCCTCACTCACCCCCTTCTTCATTGCTGCCTCACATCTTTGGCCACGCTCTTTATAACCACTCTAAGTTCTCAGGCCTTCAACTCTCTCAGGATGCTGATCCTTCTTCTCAGCCTCCCCCGCCGCCTCCGCAGCTCGCCGATTCAGTTAGTGCTGCCACTGCTGCCATTGCAGCTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATTACTTCCATTATTGGAGGTGCACAACACCAAAACAATAATGGCAACACCAACAATAGCACTGTTGTTAATAATGGCAACAACACTAGTACTCCCAACAACAATACCAATGGAAGCAATAATAATATCAACAGTTCCAATTTCTCATCAGAGAACTAG 1098 0.4781 MQVVALMQQHKPEEEEEKKQDAAPRQFMDLGLATNGAETGEEASLSSSERSKSPERKNGSSDDHEKNSREDSPLAPRNVDQAEATMRKARVSVRARSEAPMMTDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPNHQNHFQLPFPHSPPSSLLPHIFGHALYNHSKFSGLQLSQDADPSSQPPPPPPQLADSVSAATAAIAADPNFTAALAAAITSIIGGAQHQNNNGNTNNSTVVNNGNNTSTPNNNTNGSNNNINSSNFSSEN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01539 365 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 343 IPR044810 GO:0003700
Adu08g01539 365 SUPERFAMILY WRKY DNA-binding domain 95 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu08g01539 365 ProSiteProfiles WRKY domain profile. 97 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu08g01539 365 MobiDBLite consensus disorder prediction 1 96 - -
Adu08g01539 365 MobiDBLite consensus disorder prediction 9 24 - -
Adu08g01539 365 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu08g01539 365 MobiDBLite consensus disorder prediction 271 291 - -
Adu08g01539 365 MobiDBLite consensus disorder prediction 48 73 - -
Adu08g01539 365 MobiDBLite consensus disorder prediction 325 365 - -
Adu08g01539 365 Gene3D WRKY domain 87 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu08g01539 365 SMART WRKY_cls 102 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu08g01539 365 PANTHER OS05G0567200 PROTEIN 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01539 Adu-Chr8 25611502 25613162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01539 1 332 WRKY Transcription Factor Family AT1G62300 56.150 9.64e-114 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu08g01539 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01539 - - aip:107613963 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01539 08 25611502 25613162 Adu04g00410 04 4823085 4825100 ECH
Adu08g01539 08 25611502 25613162 Adu08g01539 08 25611502 25613162 ECH
Adu08g01539 08 25611502 25613162 Adu03g01144 03 12693170 12695511 PCT