Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01527 ATGGAGGGATCCCCTGGGATTGAAGATAGCAGCAAGTCTGAGGCGCATTTGACTTCAGCTGCTGCTTTTGTGGAGGGTGGAATTCAGGATGCTTGTGACGATGCTTGCAGCATCTGTCTTGAAGCCTTCTGTGACAGTGATCCTTCCACCGTGACAAGTTGCAAGCATGAGTTTCATTTTCAGTGCATTCTGGAATGGTGTCAGAGAAGCTCCCAGTGTCCCATGTGTTGGCAACCCATCAGTCTCAAAGATCCATCCAGCCAGGAACTTCTTGAGGCTGTGGAAAGAGAGAGGAACTTTAGGTTAAATCCACCTAGAAATGCCACAATATTTCATCATCCAACTCTGGGGGATTTTGAGTTACAACATTTGCCAGTTGGAGCAAATGATGCTGATCTTGAGGAGCATATAATCCAACACTTGGCTGCTGCTGCTGCAATGGGCCGAGCACGTCACATTGCAAGAAGGGAAGGCCAGAGAAACAGGTCATCAGCTCAAGGTCGCCCTCATTTTTTGGTATGGTCGACCCATCCCAATTCTCCTCCTGTCGCTCCTGCTTCTTCTTCTCCTACTCACAGCCAGAGGGGGGATGGTGAACAAACACCTGCAGTTGCTTTTGCCACTCTTTCTCCAGCTCCTGCAACTGGAGAAGAATCACCACAGCTTACTTCAGTTCCTCCTGTTCTAGCTGAACAGGTTTCTGCTTCAGGATCTGGGTCTGCTGTACACAGCATTGATCATCAGGGATCATCTAACAATAGGAGATCTCCTAGCCAGTCTTCTCCAAGTAGTCAGGATAGAGCGGGGCCATCGGAATTACAGTCCTTTTCAGAATCCCTGAAATCTAAATTAAATGCTGTGTCGTCAAGATACAAGGAGTCAATTTCCAAGAGCACAAAAGGGTGGAAGGAGAGATGGTTCTCTCGTAATACTTCTATGTCTGATATTGGATCTGAAGTCAGACGAGAAGTTAATGCTGGGATTGCAACCGTGTCACGAATGATGGAACGCCTGGAAACTAGAGACAGTAACAGAAGTAATAGCAATACCAATAGCAATACTGCACCAAGTAATTTGGAGCATGGTTCAGGTCAGGGATCAAGTGATCAGCTTTTAACAGAAACTGAAGGGAGTCAACTGAGAGACACCAACACAAAAACATCTTGTGCTGCAGGTTCTAGTTCTAGTTAA 1191 0.4652 MEGSPGIEDSSKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHFQCILEWCQRSSQCPMCWQPISLKDPSSQELLEAVERERNFRLNPPRNATIFHHPTLGDFELQHLPVGANDADLEEHIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVWSTHPNSPPVAPASSSPTHSQRGDGEQTPAVAFATLSPAPATGEESPQLTSVPPVLAEQVSASGSGSAVHSIDHQGSSNNRRSPSQSSPSSQDRAGPSELQSFSESLKSKLNAVSSRYKESISKSTKGWKERWFSRNTSMSDIGSEVRREVNAGIATVSRMMERLETRDSNRSNSNTNSNTAPSNLEHGSGQGSSDQLLTETEGSQLRDTNTKTSCAAGSSSS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01527 396 MobiDBLite consensus disorder prediction 344 396 - -
Adu08g01527 396 MobiDBLite consensus disorder prediction 171 199 - -
Adu08g01527 396 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 5 395 - -
Adu08g01527 396 MobiDBLite consensus disorder prediction 335 396 - -
Adu08g01527 396 ProSiteProfiles Zinc finger RING-type profile. 36 76 IPR001841 -
Adu08g01527 396 MobiDBLite consensus disorder prediction 232 318 - -
Adu08g01527 396 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 85 IPR013083 -
Adu08g01527 396 SUPERFAMILY RING/U-box 29 83 - -
Adu08g01527 396 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 5 395 - -
Adu08g01527 396 MobiDBLite consensus disorder prediction 232 295 - -
Adu08g01527 396 SMART ring_2 36 76 IPR001841 -
Adu08g01527 396 MobiDBLite consensus disorder prediction 180 198 - -
Adu08g01527 396 Pfam Ring finger domain 35 76 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01527 Adu-Chr8 25446487 25450196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01527 33 84 C3H Transcription Factor Family AT4G00335 42.308 1.74e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01527 K19043 - gmx:100814908 590.112