Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01524 ATGTGTGGTTGGTTGTGTATGTTGTATTCCAAAAATGGGTACTGGCAGGTTAGTGTTCCATGTAGCAGTTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCTCTTCAAGCATTGCCTCCTCAAGACCCTCACCATCATCAGTCACAGAAGCAGCACCTGAGCTTCCAAGATCCAAGCAGCAAGGAACTGGGATCATCCTCGTCAAGATGCAACAAGTTATCAGCAGCATTTGATCCTGTAGACCATGATCCCCAACCTAGGATCCCTCCCATTCGTCCTCCGGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGCAACCCAGACATAAGCCACAGGGAAGCTTTCAGCACAGCAGCCAAAAATTGGGCTCATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGAAACAAACAAGCAAAGTTGGACCAAGGGGAAGGGACTCAAAAGTCTAATGGATTCTACTGA 543 0.4586 MCGWLCMLYSKNGYWQVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQALPPQDPHHHQSQKQHLSFQDPSSKELGSSSSRCNKLSAAFDPVDHDPQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSNGFY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01524 180 MobiDBLite consensus disorder prediction 64 85 - -
Adu08g01524 180 Gene3D High mobility group box domain 102 169 IPR036910 -
Adu08g01524 180 PANTHER PROTEIN YABBY 6-RELATED 11 180 IPR006780 GO:0007275
Adu08g01524 180 MobiDBLite consensus disorder prediction 49 112 - -
Adu08g01524 180 PANTHER AXIAL REGULATOR YABBY 2-RELATED 11 180 - -
Adu08g01524 180 SUPERFAMILY HMG-box 102 150 IPR036910 -
Adu08g01524 180 Pfam YABBY protein 16 157 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01524 Adu-Chr8 25392844 25400390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01524 17 180 C2C2-YABBY Transcription Factor Family AT1G08465 65.089 2.26e-67 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Adu08g01524 YABBY 1.4e-60 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01524 K25796 - gmx:100500026 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01524 08 25392844 25400390 Adu03g01129 03 12472665 12482181 PCT