Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01511 ATGGCAACGTACTTTCATGGAAGCAATTCTGAAATGCAATCTTCTTCGCCTTCAGCTTCCGCTTCTGGTGCAGATGGTGGCTTGCAGACACTTTACCTTATGAACCCAAACTACCACCACGTGCCCTATTCTGACGCGCCGACGCAAAACATGCTTCTTCTTAATCCTAACCACCAAGCTCACGCGCTCAACCTCGCCAACTTATCCCACGCGCCCCCTCCACCACACCACCAACTACTCATTCATCGACTTCCCAACTCCGACGACAACACCCGGGCCTCTCTCTTCGGACACCACGACATCGCCACGGCTACCGCCCCGCCCACTTTCCACGGCTTCTCTGCGCCGCGCGTGCAGTACAATCTGTGGGGCTCTGTGGTCGACCAGCCTCAGCCGTCGCCGTCCAGCAGCTCCGGAGGCGCCGACATGGGTTTCCGGCGGCCTACTCAGCAGGGCTTATCGCTCAGCCTCTCCTCACAGCAGCAGCAGCAGCAGCAACAGCAACAAACAGGTACCTATAGGTCTCTCTCCGGCGAGGTTGAAGTTGCCGTTGCCGGAGGTGTCGGTAACTCGCCGTCATCGGCGTCGAACGGGATCTCGGGCGTGCAGGGTGTTCTGTTGGGATCAAAGTACCTGAAAGCCGCACAGGAGCTTCTTGACGAGGTGGTGAACGTGGGCAATAAGGGAATTTCAAAGGAGGAGTTGGCAGAGAAGGTGAAGCCCAATAGGGAATCAAATTCTGGCGTGGGCGAAGGATCCAGTGGCGGCGGCGGAGAGAACAGTGACGCCGGGAAGCATGTTGCTGAACTGACCACTGCTCAGAGACAAGAGCTTCAGATGAAGAAATCCAAGCTTGTCTCCATGCTCGATGAGGTGGAACAAAGGTACCGGCAATACCACCACCAAATGCAAGTTGTGATATCATCGTTTGAGCAAGCGGCGGGTTTCGGGGCGGCCAAATCGTACACGTCGCTAGCCCTAAAGACAATCTCGAAGCAATTCCGGTGCCTTAAGGATGCCATATCTTCACAGATAAGAGCAACGAGCAAGACATTGGGAGAGGATGATTGCTTAGGAGCTAAGGTAGAAGGTTCCAGGCTTAGGTATGTGGATCACCATCTTCGTCAACAAAGGGCACTGCAGCAACTTGGAATGATTCAACCCAATGCTTGGAGGCCACAAAGAGGCTTACCTGAACGCGCTGTTTCAATTCTTCGTGCATGGCTTTTTGAGCATTTCCTTCACCCTTATCCTAAGGACTCTGATAAAGTGATGCTAGCAAAGCAAACTGGACTTACTAGGAGCCAGGTGTCTAACTGGTTCATCAATGCCCGGGTTCGGCTATGGAAACCAATGGTTGAGGAAATGTACATGGAAGAAGTGAAGGAGCAAGAAAACAATAACAATAACAACAACAACAACAACGGTTCGGAGAGATCAAAGGAATCAAGCAAGGAGTTAGGTTCAGCTTCAAATGCTACTACTAATAATGGAGCTCCTGATAATAATAACAATAATAATCCAGTTCTTGATCCCATAAAAGTTCTTCATCAATCAAAACAAGAATGCTTCAACAACAACAGCTCTCCAACCGGCGCCGGCGAGATCTCGGTGAATTCTTCCTTGTCCACTTCTCCCATGGGTGGAGGAGTAGGATCCCTTCAATCCCACAGCGGTTTCCATCTTGCAGGTTCCTCTGACATGCAAATTAGGAGCCCAAACAAGGCTAGAAACGCTTCCGAAATTATGCATAACTCCCCAAGTAGTATCCTCTCAGTGGACATGGAAATGAAGCACATCAATGGGGATCATCATAGAGAACCCAATAGTATCACTGGTTATGGAGCTTTCTCAATGGAAGACATTGGAACCAGGTTCAGTACTGTCACTGATCATCATCATCATCAATTAGGTTCTTCAAGGTTCCAAGGAAACAATGGTGTGTCTCTCACCCTGGGGCTTCCACACAACGACAACAGTGTTCCTATCTCCGCAACTCAACATGGATTTCTTCCACAGAATATGCATAGTTTGGGAAGGAGACTTGAGATTGGAAACAATGGGAACGAGTTTTGTGTGATCAACAATCCAAGTTCTTCTCACCCTGGACCTACCTATGAAAGCATTGACATTCAGAACAGAAAGAGGTTTGCTGCACAGTTATTGCATGATTTTGTGGCTTGA 2184 0.4963 MATYFHGSNSEMQSSSPSASASGADGGLQTLYLMNPNYHHVPYSDAPTQNMLLLNPNHQAHALNLANLSHAPPPPHHQLLIHRLPNSDDNTRASLFGHHDIATATAPPTFHGFSAPRVQYNLWGSVVDQPQPSPSSSSGGADMGFRRPTQQGLSLSLSSQQQQQQQQQQTGTYRSLSGEVEVAVAGGVGNSPSSASNGISGVQGVLLGSKYLKAAQELLDEVVNVGNKGISKEELAEKVKPNRESNSGVGEGSSGGGGENSDAGKHVAELTTAQRQELQMKKSKLVSMLDEVEQRYRQYHHQMQVVISSFEQAAGFGAAKSYTSLALKTISKQFRCLKDAISSQIRATSKTLGEDDCLGAKVEGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEVKEQENNNNNNNNNNGSERSKESSKELGSASNATTNNGAPDNNNNNNPVLDPIKVLHQSKQECFNNNSSPTGAGEISVNSSLSTSPMGGGVGSLQSHSGFHLAGSSDMQIRSPNKARNASEIMHNSPSSILSVDMEMKHINGDHHREPNSITGYGAFSMEDIGTRFSTVTDHHHHQLGSSRFQGNNGVSLTLGLPHNDNSVPISATQHGFLPQNMHSLGRRLEIGNNGNEFCVINNPSSSHPGPTYESIDIQNRKRFAAQLLHDFVA 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01511 727 MobiDBLite consensus disorder prediction 523 584 - -
Adu08g01511 727 SUPERFAMILY Homeodomain-like 392 458 IPR009057 -
Adu08g01511 727 ProSiteProfiles 'Homeobox' domain profile. 388 451 IPR001356 GO:0003677
Adu08g01511 727 Pfam Associated with HOX 205 342 IPR006563 -
Adu08g01511 727 SMART prehox3 200 343 IPR006563 -
Adu08g01511 727 Coils Coil 275 295 - -
Adu08g01511 727 Coils Coil 454 474 - -
Adu08g01511 727 MobiDBLite consensus disorder prediction 125 174 - -
Adu08g01511 727 MobiDBLite consensus disorder prediction 463 478 - -
Adu08g01511 727 MobiDBLite consensus disorder prediction 1 23 - -
Adu08g01511 727 Pfam Homeobox KN domain 408 447 IPR008422 GO:0003677|GO:0006355
Adu08g01511 727 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 21 676 - -
Adu08g01511 727 CDD homeodomain 391 452 IPR001356 GO:0003677
Adu08g01511 727 SMART HOX_1 391 455 IPR001356 GO:0003677
Adu08g01511 727 Gene3D - 388 465 - -
Adu08g01511 727 MobiDBLite consensus disorder prediction 486 511 - -
Adu08g01511 727 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 21 676 - -
Adu08g01511 727 MobiDBLite consensus disorder prediction 236 264 - -
Adu08g01511 727 MobiDBLite consensus disorder prediction 463 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01511 Adu-Chr8 25215827 25219771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01511 1 727 Homeobox Transcription Factor Family AT2G35940 44.574 4.85e-137 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Adu08g01511 POX 6.1e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01511 - - gmx:100779075 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01511 08 25215827 25219771 Adu08g01511 08 25215827 25219771 ECH
Adu08g01511 08 25215827 25219771 Adu03g01104 03 11986388 11993489 PCT