Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01499 ATGTTTCTCAGCAATAATTTTTGTAGCTGGAGAGAGGTACCAATGGGGTCTCGCATGGATCAGTACGAGATCATGGAGCAGATCGGCAGAGGAGCATTTGGAGCTGCAATTCTCGTTCATCACAAGACAGAGAAGAAAAAATATGTGTTGAAGAAAATAAGGCTTGCTAGGCAGACTGAAAGGTGCAGAAGAGCTGCACATCAAGAGATGGTTCTTATTGCTCGAATTCGGCACCCGTACATTGTGGAATTCAAAGAGGCTTGGGTTGAGAAGGGTTGCTTTGTCTGCATTGTTACTGGATACTGTGAAGGTGGAGACATGGCTGCATTGATGAAAAAATCAAACGGGGTATACTTTCCGGAGGAGAAACTCTGCAAGTGGTTTGCACAATTACTCTTAGCGGTGGAATATCTGCATTCCAATTATGTATTACATCGTGACTTAAAGTGTTCAAACATTTTTCTTACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGGCTTGCCAAGACACTAAAAGCAGATGATTTGGCATCTTCGGTGGTAGGAACTCCCAACTACATGTGTCCTGAACTGCTTGCAGATATTCCTTACGGATTCAAATCTGATATTTGGTCATTAGGGTGTTGTATATATGAAATGGCTGCTCATCGCCCTGCATTTAAAGCTTTTGATATGGCAGGATTGATAAGTAAGGTGAACCGTACCGCAATCGGCCCATTGCCTTCCTGTTATTCCCCATCTTTGAAAATGCTAATAAAGTGCATGCTGCGAAAAAATCCCGAGCATCGTTTATCAGCATCTGAGATCTTAAAACACCCCTATCTGCAACCTTATGTTGATCAATATCGTCCGTCTTTTTGTCCGCCTACAACCTGTTCTCCTCAAAAGTCTATTGGAGTTTTCCATGATCCTCGAAGAAATAGGCCTGAAAGCCAAAACAATAATAGCTCAAGCAGTGACAAAGATTGTTTGATATCAAATGAGAGAAACATGGAAATGGCAGAGCCAAATTTTGGTAGAGAAACCACAATTCAGGCATTAGTTGTTGATGATGGCTCTGAGTATCCCCTGCCCAGTGAAGAAGGAAATGGTTCCAGCAATGCTAAAACAGTAAAGGTGGTGAAGCCATCTCATAATGAAAACCATCCAAATATTGCATCTAAGGAACAAAACCTTTTCAAGAATACAATGATTGCTTTAAAAGACAGAAGAGTTAGAGAATCAAGTTCTCCAATGAGAGGCAATCACATAAAGGCTGGCAATGTATCCATCCAAAAAATAAATACAGAGATACCTTCCAAATTGCCGAAACCTAGTTTTGGTTTGAGGCCTAATTTAGAGGCACCAACTATTGCACCTGCAAAAGCAACCTTTGATTCTGCAAAGGGATCACATAGTTTAAAGTATCAGTTACCGATGACAGAATCATTGCCGAAAACCAGACCTCGAGATATTGTGACTCTGCCATCCGGCCGAACCAAACAAACAGTTGGAAATGGAGTTCCTGCCAAGCCAAGGCAAATGACTCCTACAAGATCACTCAGACCACCTTCATCTCCAGTTCGTATGAGGCAGGCCAGGCTTGATTTTCCAAACATAGTGAATGATATAAGAAACTCGAATCCAGTGGTTCATGAGCCTAAGATAAGCCATCATAGGTTGACTAACAGTCATATACCACGTGTTTCGAGAGATATTAGGAAAGAGCCTCGGAAGTATTCTGAACATTGCTCAAAAGGAATGCAAACAGACAGCAGCAATTCAGTCTCATCTTCGGTGTCTATTCAAGGATTTGAACTTTGTGATGATGCAACTACTTTTATGGACTTGAGTGAACTCACACTTGCTGATCATGAGAGTATAAACCACATTGAGAATGTGGAATCACATCTAAATAGCAACTTGCCTCTTACGCATTCCGAGACATCTGAAGATGTGTCTTGGGAATCTGCAAGGCTTCCACGGAGCTTCCATAATAGCAATACAAGCAATGAGAATCTAAGTTCCACTTTATCTCAGGATCACTCAGTTCAAGATCATAAGGGAATTTTCGCTTCTGATGATGGTTGTCCCATAAATCGGACAACCATATCTGCTGCCTCAGGTTGTGGTAGAAAATCTCTACAGCCCTCTGCTTCAGCTGCAAAAGAATCAAAAGAGCTTCAAGACATTTCTGTGGAAACTACTTCAGCTAAGTCTCTGAAGCATCCAATTCCCATTTCTGAAGAGAAGTCTTCTTGTGAAGAAAGCACACCGGATAATAGGCCTGATAAAGATAGCCAACCAAAACTTATGATCACCCCAAGTGGTGATGAAGAATCCAAGGTAACCAAAAGATTGTCATCAGTGGCTGAAACAGATCCTCTGATAGTCTCCACTAAAATTCCAAGCCAGGACATTTTGCAAGAAGAGAAAGGAGCAGTTTTACAGAACACATCAGCTGAAATTTCATCTGCTGATCAACTTCCTCCAGCTTATGGTGATGTCATCCATGTTATACGGCATAGTAGTTATCGTGTCGGGAGTGAGCAGCCGGTGAAGGAATCTGTAGAAGTGGGAGTTCAAAATGTTGATGTTGGCAAGTTCATCAGCATTGTAAAGGATGATGCAGAGATGAGAAATGTAAGCACTCCTTTGGCCCTTAATTCTTCAGATTCTTCTGATCATTTAGAATCTCCAAGTTGCCCTGGCACGTTGAGTTTGGAATCAAGTACTCTTGACCAACCTACCATTAAGGATCAAGATTTGAAAAGCCCTGATTCTACAGTATCAAAATCTGATTCCACTAAATATGAGACTATTACAGTCAAAGATGAAACACAGGCAAAGGAAATTTTGGATGTGAAATCTTCAAGACAGAGAGCTGAGGCACTTGAAGGGCTCTTAGAACTTTCTGCAGACTTGCTGGAGCAGAACAAATTGGAGGAACTTTCAGTTGTTTTGAAGCCATTTGGAAAAGATAAGGTATCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTAAAAGGATTAATGATTGAGGATAGTGTGGGAAGAGCTTCATGA 3051 0.4156 MFLSNNFCSWREVPMGSRMDQYEIMEQIGRGAFGAAILVHHKTEKKKYVLKKIRLARQTERCRRAAHQEMVLIARIRHPYIVEFKEAWVEKGCFVCIVTGYCEGGDMAALMKKSNGVYFPEEKLCKWFAQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKVNRTAIGPLPSCYSPSLKMLIKCMLRKNPEHRLSASEILKHPYLQPYVDQYRPSFCPPTTCSPQKSIGVFHDPRRNRPESQNNNSSSSDKDCLISNERNMEMAEPNFGRETTIQALVVDDGSEYPLPSEEGNGSSNAKTVKVVKPSHNENHPNIASKEQNLFKNTMIALKDRRVRESSSPMRGNHIKAGNVSIQKINTEIPSKLPKPSFGLRPNLEAPTIAPAKATFDSAKGSHSLKYQLPMTESLPKTRPRDIVTLPSGRTKQTVGNGVPAKPRQMTPTRSLRPPSSPVRMRQARLDFPNIVNDIRNSNPVVHEPKISHHRLTNSHIPRVSRDIRKEPRKYSEHCSKGMQTDSSNSVSSSVSIQGFELCDDATTFMDLSELTLADHESINHIENVESHLNSNLPLTHSETSEDVSWESARLPRSFHNSNTSNENLSSTLSQDHSVQDHKGIFASDDGCPINRTTISAASGCGRKSLQPSASAAKESKELQDISVETTSAKSLKHPIPISEEKSSCEESTPDNRPDKDSQPKLMITPSGDEESKVTKRLSSVAETDPLIVSTKIPSQDILQEEKGAVLQNTSAEISSADQLPPAYGDVIHVIRHSSYRVGSEQPVKESVEVGVQNVDVGKFISIVKDDAEMRNVSTPLALNSSDSSDHLESPSCPGTLSLESSTLDQPTIKDQDLKSPDSTVSKSDSTKYETITVKDETQAKEILDVKSSRQRAEALEGLLELSADLLEQNKLEELSVVLKPFGKDKVSPRETAIWLAKSLKGLMIEDSVGRAS 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01499 1016 MobiDBLite consensus disorder prediction 703 736 - -
Adu08g01499 1016 MobiDBLite consensus disorder prediction 738 761 - -
Adu08g01499 1016 MobiDBLite consensus disorder prediction 656 676 - -
Adu08g01499 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 15 999 - -
Adu08g01499 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Adu08g01499 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 15 999 - -
Adu08g01499 1016 MobiDBLite consensus disorder prediction 703 783 - -
Adu08g01499 1016 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01499 1016 MobiDBLite consensus disorder prediction 482 523 - -
Adu08g01499 1016 Gene3D Transferase(Phosphotransferase) domain 1 104 348 - -
Adu08g01499 1016 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01499 1016 CDD STKc_Nek 21 276 - -
Adu08g01499 1016 MobiDBLite consensus disorder prediction 880 931 - -
Adu08g01499 1016 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Adu08g01499 1016 Gene3D Phosphorylase Kinase; domain 1 8 101 - -
Adu08g01499 1016 MobiDBLite consensus disorder prediction 298 324 - -
Adu08g01499 1016 SUPERFAMILY Protein kinase-like (PK-like) 18 321 IPR011009 -
Adu08g01499 1016 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01499 Adu-Chr8 25063679 25069385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01499 26 287 MAP Kinase Kinase Kinase AT3G06030 33.692 6.04e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Adu08g01499 Pkinase 7.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01499 K08857 - gmx:100780141 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01499 08 25063679 25069385 Adu08g01499 08 25063679 25069385 ECH
Adu08g01499 08 25063679 25069385 Adu03g01092 03 11668694 11674388 PCT