Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01491 ATGGTGGACACGGATTCAAGCGAAGCACACATGTCAATAGCAGCTTCTTCCATATTCCCTGGCTTCAGGTTCTGTCCCACTGACGAGGAGTTGATCTCTTATTACCTCAGGAAAAAGCTGGACGGTGATGAAGACAGTGTTCAAGTCATTTCGGAGCTTGAACTTTGCACTTTTGAGCCTTGGGATTTGCCAGGAAAATCTTTCATTCAATCAGACACCGAGTGGTTTTTCTTCTCGCCACGGGGGAGAAAGTATCCCAATGGTTCACAGAGTAAAAGGGCAACTGAATGTGGGTATTGGAAGGCCACAGGAAAAGAACGCATCGTAAAATCCGGTCAGGATGTTATTGGTACCAAACGCACTTTAGTATTTCATCTTGGTCGAGCTCCTAAAGGCGAAAGAACTGAATGGATTATGCATGAGTACTGTGTCAATGACAAATCTCAGGATTCATTGGTGATTTGTCGGCTGAAGAAAAATACAGAATTTCGTGCTAATGATCATTCTAATAAAACTTCACATGATAGTGATTGTGGAGTCTCAGAAGAAGTTACAGTTCAAGGGGGCACTTATGTGCCTATTCAAGATAAAGAAACTGGATGCAGCTCCAAGAGAACTAGCAGTAGTAATAGTTCTCCTTCTACTACTACTGGCCAAATTGAATCCAGTCATAGAGTTGTCAATGAAGCCAATCAAGCCAATGAAGTGGACGAAGATGATTGTTATGCAGAGATCCTAAATGATGATATCATCAAGTTAGATGAATCAACACTCTCACGGCCATCGCCACCACAAGGGACAGCAAACAGGAGAATCAGGCTAAGGGTTCCCAAATCAACAGTTCCCAAATCAAGGGTTCCCAAATCAACGGTTCCAACAGGAAATGGTTGCCATTGCTCCAAGCAATCATCAAACAAAATTAACACCTTCCTGCCATATGCTTTGGTGGTCTTCACTTTCTTCGTTTTCACTTTGTTAGCTCTAGGCTTCTTTCTTATTATTAGGAGGTCCCAAACTACTGCGCAATATTCTCGAGACCTCTCTAGAGTAGGCTGCCAGGAGGATGCTGCAGTCAGTATGGAGAGAAGCAGAAGTGGCTATGATGAGAATGCAGCTTCTGGCGCCGCTGGCACGGCCCTGGAAAAGGGGGTGGGTAACTGGGATCCGGCGGCAGAATTGGTTTCCGACAGGCTTACAGAGGCTGCGCAAGGAGAGGGCAGAATAGTAACTTCTGATTTCGAGTGGAAGCAACAGCTAGTGGCCGATGTTGACTCAAATACCGCTCTATCTCAAAAGCAGCATCAGATTACAAAGGGTGAAGAAACTGTGAAGGAGAAGATCATTTTAGTACAAGAAAAGAATATACGAAGACTGAACGAGCTTGTGCGGCATCTCCAGGAACAACTGCAGCAGTGTAGAGGAAGCAATGGAACTACAAATGGCACTGCAAGCCCTCTAGCAGAGCGGATTCTGGAGCTCGAGCGACAACAGATTTTAGAGGATTAA 1506 0.4489 MVDTDSSEAHMSIAASSIFPGFRFCPTDEELISYYLRKKLDGDEDSVQVISELELCTFEPWDLPGKSFIQSDTEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERIVKSGQDVIGTKRTLVFHLGRAPKGERTEWIMHEYCVNDKSQDSLVICRLKKNTEFRANDHSNKTSHDSDCGVSEEVTVQGGTYVPIQDKETGCSSKRTSSSNSSPSTTTGQIESSHRVVNEANQANEVDEDDCYAEILNDDIIKLDESTLSRPSPPQGTANRRIRLRVPKSTVPKSRVPKSTVPTGNGCHCSKQSSNKINTFLPYALVVFTFFVFTLLALGFFLIIRRSQTTAQYSRDLSRVGCQEDAAVSMERSRSGYDENAASGAAGTALEKGVGNWDPAAELVSDRLTEAAQGEGRIVTSDFEWKQQLVADVDSNTALSQKQHQITKGEETVKEKIILVQEKNIRRLNELVRHLQEQLQQCRGSNGTTNGTASPLAERILELERQQILED 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01491 501 MobiDBLite consensus disorder prediction 189 226 - -
Adu08g01491 501 Coils Coil 448 475 - -
Adu08g01491 501 MobiDBLite consensus disorder prediction 196 226 - -
Adu08g01491 501 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Adu08g01491 501 Gene3D NAC domain 27 164 IPR036093 GO:0003677|GO:0006355
Adu08g01491 501 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Adu08g01491 501 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 328 - -
Adu08g01491 501 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 328 - -
Adu08g01491 501 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01491 Adu-Chr8 24941083 24954552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01491 6 264 NAC Transcription Factor Family AT2G27300 57.197 5.32e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu08g01491 NAM 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01491 - - adu:107462050 672.159