Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01480 ATGGAGGATCCACCAACTGGTTTTCGGTTCTATCCAACAGAAGAAGAGCTAGTTGCTTTCTACCTAAACACCCAGCTTCAACTACAAGGCCACACGACTCACATCAACAGGGTCATTCCAGTGGTTGACATCAATGGCGTTGAGCCCTGGACTCTTCCATTGATCGGAGTGAAGAAAACCATGGTTTTCTACAAAGGAAAAGCTCCCACCGGTCGCAAAACTAAATGGAAGATGCATGAATACCGCGCCATCGTTCAAGCCCCTAACCAATCTCCCACGGCTATTCCTCAGTTGAGGCACGAATTCAGCTTGTGTCGCGTGTACGTGATATCCGGAAGCTTCAGAGCATTTGATCGACGGCCACGGGAGGTGGTAGTGCCAAGAGTTCTTCATCATGGTTCTTCTACAACAAGTGCTCAGCAGCATCAAGGAGAATCATCAGCAAGGGTGCAGGCCAATAATAATAATAATGGGTCGAGCTCGTCGGAAACTTCCCTTTCATCAGGTGGTCCTGATTTGCCACCAGATACTGGAGGAGGAGGGTCATGTAGCAATTGGAATAGTAGTGAGGTTCAAGTTCAAGCTCAAGTTCAAGAACCACTATGGGAATGGGAACAACTCGATTGGCTATAA 633 0.4771 MEDPPTGFRFYPTEEELVAFYLNTQLQLQGHTTHINRVIPVVDINGVEPWTLPLIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIVQAPNQSPTAIPQLRHEFSLCRVYVISGSFRAFDRRPREVVVPRVLHHGSSTTSAQQHQGESSARVQANNNNNGSSSSETSLSSGGPDLPPDTGGGGSCSNWNSSEVQVQAQVQEPLWEWEQLDWL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01480 210 Pfam No apical meristem (NAM) protein 5 53 IPR003441 GO:0003677|GO:0006355
Adu08g01480 210 Pfam No apical meristem (NAM) protein 55 82 IPR003441 GO:0003677|GO:0006355
Adu08g01480 210 Gene3D NAC domain 53 113 IPR036093 GO:0003677|GO:0006355
Adu08g01480 210 SUPERFAMILY NAC domain 4 108 IPR036093 GO:0003677|GO:0006355
Adu08g01480 210 MobiDBLite consensus disorder prediction 131 171 - -
Adu08g01480 210 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 54 209 - -
Adu08g01480 210 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 53 - -
Adu08g01480 210 MobiDBLite consensus disorder prediction 131 191 - -
Adu08g01480 210 ProSiteProfiles NAC domain profile. 1 110 IPR003441 GO:0003677|GO:0006355
Adu08g01480 210 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 54 209 - -
Adu08g01480 210 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01480 Adu-Chr8 24838866 24839935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01480 7 209 NAC Transcription Factor Family AT5G22380 38.760 1.00e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu08g01480 NAM 2.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01480 - - gmx:100780264 181.8