Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01435 ATGAGATTGGAGAAGTGTTGGTTTTGTTCCTCAACGGTATATCCTGGTCATGGAATCCAGTTCGTTCGTAATGATGCCAAGATTTTTCGATTTTGCGGGTCTAAATGCCATAAGAACTTTAAAATGAAGAGGAACCCTCGTAAGGTCAAATGGACCAAGGCATATCGAAGAGTGCATGGAAAGGATATGACACAGGATTCAACGTTTGAATTCGAGAGGAAGCGGAACAAACCTGAGAGATATGACAGGAACCTTGCTGAGAATGTGCTTAAGGCCATTCCTAAGATTGATAAGATCAGAGTCACCAGAGAGGAGAGACACCATAAGAATAGGATGAAGGGAAACAAGGTGAAGGTGCAGAGGGAGGCGACGAAGGAGTTGGAGCAGGGTACCAAAGATCAAAGTCATGGTTTCCCAACAGCAATCACAGCAGAATCAACCTATGGAAGAGTGATTCGTTTGGCAATGCTGGCCTTATTTTGTTCCGGAGCAGCCCTTGCTGCTCTATGGGCAAATGAGCTCTCACTGAATATTCATGAAGCATGTACTTCAAAATCTGATAAACCATTCCTGCAAATTCAGAGGGTTTTAGGGTTTCCATTCGAGGAGAAAGCCTCGAAAAAAATGGCTTCAATGGCAGCAAGAAGATCCAGCAGCACAATCGTGCGAACCATCTGTAGAGCCACTGCGAAATCGACGGCAGGGAGGTCATCATCCTCGTCCTTCCCTTTGCGCGATTCCAATCTCGGTATTCGGCATAATAACAACCGTATCGCTCCGGCGAGGTTCTCGCTCCTCCGAAGAGAATTGAGCTCCTTGAAGCCATTGCACACAGCCATTGCTTCATCTTACCTTGTTTCCAAGCTTCCCACCGAAGCTACCACCTCCTCACAAGGGAGGTTTGCTAACTATGTCAGTCCAATCTAA 927 0.4617 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCGSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNKPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGNKVKVQREATKELEQGTKDQSHGFPTAITAESTYGRVIRLAMLALFCSGAALAALWANELSLNIHEACTSKSDKPFLQIQRVLGFPFEEKASKKMASMAARRSSSTIVRTICRATAKSTAGRSSSSSFPLRDSNLGIRHNNNRIAPARFSLLRRELSSLKPLHTAIASSYLVSKLPTEATTSSQGRFANYVSPI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01435 308 PANTHER 60S RIBOSOMAL PROTEIN L24 1 129 IPR000988 -
Adu08g01435 308 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Adu08g01435 308 PANTHER BNAA04G10330D PROTEIN 1 129 - -
Adu08g01435 308 SMART 4TRASH 6 44 IPR011017 -
Adu08g01435 308 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Adu08g01435 308 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Adu08g01435 308 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Adu08g01435 308 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01435 Adu-Chr8 24110691 24114104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01435 1 130 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 75.385 1.44e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01435 K02896 - gmx:100778077 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01435 08 24110691 24114104 Adu08g01435 08 24110691 24114104 ECH