Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01424 ATGTTTTACACAACTTTGAATGCGTGTATCTATTTAATAGAATCTAAACATGCAACCTTAGTTTCCGTATATTTTTGCTCAATCTTTTATTTTTCCTTAACTTATGATTTGTTTCCTTCTATCACTGAGGAGGATGATTTTTCAGACGATAGTAGTGATGAGGATCATCCATTGCCAGTTGCACAAAATGGAAAAACTGAAGTAAAAGTTGAGGAAGTAAAGGTTTCTCAATCTAAAAAACCTGATGCTCAGGCTGGTGCATCAAAACAAGTAAAGGTAGTTGAACCAAAGAAAACAGAGGATTCAGACGATGAATCTGATGAGGATGATGAAATTGACAGTTCAGATGAAGAGATGGAGGATGGCGAGAGTGATGAGGAGGGTGAAAGTGATGAAGATGATGATGAGGAAGATACCCCACCCAAGAAGGTGGACCAAGGAAAGAAGAGGCAAAATGAATCCGCGACAAAAACTCCTATTTCTAACAAGAAAGCAAAAAATGCTACCCCTGAAAAGACCGATGCTAAGAAAGGTGGCCATACAGCAACTCCTCACCCAGCAAAGAAGGGTGGAAAGACTCCAAACAGTGATGGCAAGGACACTCCCAAGTCTGGTGGACAATTCCTCTGCAAAAGTTGCAACAAGAATTTCAATTCTGAAACTGGTCTCCAACAACATAGCAAGGCTAAGCATGGTCAGTGA 702 0.4017 MFYTTLNACIYLIESKHATLVSVYFCSIFYFSLTYDLFPSITEEDDFSDDSSDEDHPLPVAQNGKTEVKVEEVKVSQSKKPDAQAGASKQVKVVEPKKTEDSDDESDEDDEIDSSDEEMEDGESDEEGESDEDDDEEDTPPKKVDQGKKRQNESATKTPISNKKAKNATPEKTDAKKGGHTATPHPAKKGGKTPNSDGKDTPKSGGQFLCKSCNKNFNSETGLQQHSKAKHGQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01424 233 MobiDBLite consensus disorder prediction 44 209 - -
Adu08g01424 233 MobiDBLite consensus disorder prediction 167 181 - -
Adu08g01424 233 ProSitePatterns Zinc finger C2H2 type domain signature. 210 231 IPR013087 -
Adu08g01424 233 Gene3D Classic Zinc Finger 195 233 - -
Adu08g01424 233 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 27 229 - -
Adu08g01424 233 MobiDBLite consensus disorder prediction 214 233 - -
Adu08g01424 233 PANTHER HISTONE DEACETYLASE HDT1-LIKE 27 229 - -
Adu08g01424 233 MobiDBLite consensus disorder prediction 101 139 - -
Adu08g01424 233 SUPERFAMILY beta-beta-alpha zinc fingers 202 230 IPR036236 -
Adu08g01424 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 208 233 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01424 Adu-Chr8 23957616 23960327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01424 155 231 C2H2 Transcription Factor Family AT5G03740 55.172 2.82e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu08g01424 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01424 - - lang:109358867 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01424 08 23957616 23960327 Adu08g01424 08 23957616 23960327 ECH
Adu08g01424 08 23957616 23960327 Adu03g00054 03 482725 485011 PCT