Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01405 ATGGCGGAGGACCGGAAGAATGAGGGAAGTGACTACAGTTCGGAGGAGGAAGGAACTGAGGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGGGATACATTCAAGAATGGATGTTATGTGGTTCAGAGCAAGCTTGGTTGGGGCCATTTTTCCACCAGATATGTCGCCCTAAAAATTCAGAAGAGTGCTCAGCACTACACTGAAGCAGCAATGGATGAAATAAAGATTCTCAAACAAATTGCAGATGGAGATCCACATGACAATAAATGTGTTGTGAAGCTTTTGGATCACTTCAAGCATTCAGGACCCAATGGCCAGCATGTCTGTATGGTTTTTGAATTCCTTGGGGACAATCTTCTCACTCTTATCAAGTATAGTGATTATCGAGGAGTTCCTCTTCCCATAGTTAAGGAAATCTGCTTCCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCGGAGAATGTCTTGCTTCTGTCACCACTGGATCCATCTAAGGATCCTAGGAAATCAGGCATTCCACTTATTGCTCCAAATACGAAGGAGAAGATCAGCAATGGGACCATAAAAGACGAAAGAAGTTTGCATGCAGACTTGACCAAGAACCAGAAAAAGAAAATGCGGAAAAAGGCTAAAAAGGCAGCTCAAGCTTGTGTTGGGATGGAAAGTCCCGAGGAAGCCGAGGAGGATGGTAAAACACCTGAGCAAGATGAATGTAGTAAAGATGTGGAACTAAGTTTAGAATCCAGTGAAGTTAATGGTTCTGTGGGCAAAGATGAATCGACAAAGGCTTCTGAAACCAAGGATGATCCCCAAGGAAGCCGTGGTCAAAGGAAATCTGAAAGAAAGAAGTTACTTGCCTCTGCTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCGTGTTGGACTTATAAACAATTCACAAACGATATTCAGACGAGGCAGTATAGATGTCCTGAAGTTATTCTCGGATCAAAATACTCAACTCCAGCAGATCTATGGTCTTTTGCGTGCATTTGCTTTGAGCTTGCGACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGACAGGGATGAGGATCATCTGGCCTTGATGATGGAGCTTCTCGGAATGATGCCTCGCAAGATTGCATTAGGTGGTCGTTATTCGCGCGAGTTTTTCAATAGATATGGTGATTTGAGGCACATCCGTCAGTTGCGGTTCTGGCCTCTTAACAAAGTACTGATGGAGAAATATGATTTCAGCGAGCAAGATGCAAATGACATGGCTGGCTTCATTATTCCATTACTGGATTTTGTCCCTGACAAGAGGCCAACAGCAGCTCAGTGCCTTACTCATCCATGGTTGAGTACAAGACCTCAGACTCTCAAACCTTCGTCCACACCTGTGCAACCGGGGGAGAAAGATGGAGAGACATTGGAAAAGACAAAGGAAAAGGCTGAGCTGGAAGCTGTGGAAGTTGGCATTGGGAATATAGCTATTGATGGAGCTCCAAAGCCAACACTTCGTCTTCCTCATCTTCTGCGAACTGAAAGCGCCAAACCCTGGCATTCGAGAGTTCTGGCGAGGCTTTTCGGAGTGAAACAAGTTGGAGTTCAGAGGAACCTGGTCATCGTTGGCTCAAGATCGCTGAAGGAAGGAGCAAAGATTCTGCGTGAAATCCCATGTGACAGAGATAGAAAAGTTGCTGGATATCAtgttctatcatgCTGTTCTGTGTCTGGATTATGTTCCACAAGAGGAGTCTGGGGTTTAAACAACAAGAATACCCCTGAGAATACCTTAAATGAAATGCCAGATGACAAATCAATGTCAAAGAGTTTCTCTCTGAAAGTGCTTGATTGA 1893 0.4406 MAEDRKNEGSDYSSEEEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPHDNKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPIVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSPLDPSKDPRKSGIPLIAPNTKEKISNGTIKDERSLHADLTKNQKKKMRKKAKKAAQACVGMESPEEAEEDGKTPEQDECSKDVELSLESSEVNGSVGKDESTKASETKDDPQGSRGQRKSERKKLLASADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRQLRFWPLNKVLMEKYDFSEQDANDMAGFIIPLLDFVPDKRPTAAQCLTHPWLSTRPQTLKPSSTPVQPGEKDGETLEKTKEKAELEAVEVGIGNIAIDGAPKPTLRLPHLLRTESAKPWHSRVLARLFGVKQVGVQRNLVIVGSRSLKEGAKILREIPCDRDRKVAGYHVLSCCSVSGLCSTRGVWGLNNKNTPENTLNEMPDDKSMSKSFSLKVLD 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01405 630 SUPERFAMILY Protein kinase-like (PK-like) 36 479 IPR011009 -
Adu08g01405 630 PANTHER SERINE KINASE-LIKE PROTEIN 9 521 - -
Adu08g01405 630 CDD STKc_SRPK 30 465 - -
Adu08g01405 630 MobiDBLite consensus disorder prediction 196 295 - -
Adu08g01405 630 MobiDBLite consensus disorder prediction 258 272 - -
Adu08g01405 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Adu08g01405 630 MobiDBLite consensus disorder prediction 467 489 - -
Adu08g01405 630 ProSiteProfiles Protein kinase domain profile. 16 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01405 630 Gene3D Transferase(Phosphotransferase) domain 1 114 466 - -
Adu08g01405 630 MobiDBLite consensus disorder prediction 273 295 - -
Adu08g01405 630 MobiDBLite consensus disorder prediction 606 630 - -
Adu08g01405 630 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 521 - -
Adu08g01405 630 Coils Coil 209 229 - -
Adu08g01405 630 MobiDBLite consensus disorder prediction 197 213 - -
Adu08g01405 630 MobiDBLite consensus disorder prediction 1 20 - -
Adu08g01405 630 MobiDBLite consensus disorder prediction 467 482 - -
Adu08g01405 630 SMART serkin_6 41 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01405 630 Gene3D Phosphorylase Kinase; domain 1 17 113 - -
Adu08g01405 630 Pfam Protein kinase domain 298 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01405 630 Pfam Protein kinase domain 55 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01405 Adu-Chr8 23750536 23755443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01405 5 517 EF-hand Containing Proteins AT5G22840 68.165 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Adu08g01405 Pkinase 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01405 K08832 - gmx:100791829 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01405 08 23750536 23755443 Adu08g01405 08 23750536 23755443 ECH