Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01397 ATGGCTATTGCTGGTGTGCATAGTGTGGCTGTGATTGACTCTACACTTCTTAGGGAGTCTCATTCTCAGTTATCAGGTAGGCGAGGGGATGGAGGAGGGAGGGGAGGTGCCCGTTCATCTTCCCTCTTGCAAATGTGGCGAGAAATCGAGGATGAACACATGGCGGGTCAAGTTCAGGGGAGGTCTGGGGAGTTGTTAATTAGGCAGAGGAGTGATGGATTGATCTCGGACCTGTCGCAGGATGATGCCTCTCGGAGAGGAGAAGGTGAAGGGCATATGATAGAAGATGCAATTTCGGGTGAGAATGAATCAGAAACATGGTCACAGTCACAAAGTCAGAATGATTCTCGTGACGATGAACACGAGGGTTTAGGCAATTCTAATTGTNCTGGGGATCATCGTGCATCAAATGTTCCCAGAGGAAGTGGTGGTTCAAGGAGACAGTGGCTTGGGGAAACTGAGCAGGAGAGGGTGAGTATCATTAGGGAGTGGGTACAGATGAGTAGCCAGCAGAGAGTTGTGTCTTCTAGTGAAAACAGGGAAGATCAATCTTCGGAGATCGGTAACCAAATTGAACGTGTTCGGGATGGATTCGTTGTTAATCAGCATGAGGGCCAATCTGAGCATACACGGAGGGGAATCCGTAGATTGCGTGGCCGGCAGGTTCTGCTTGATATGCTCAAGAAGGCTGAGGTGGAAAGGCAAAGAGAAGTTCAGGAGTTGTTTGAACACCGGGCTGTATCCCGTTTCCCCCACCGCAATCGCATTCAGGCATTGCTTAGAGGCAGGTTCTTGAGAAATGATAGATCAACTGATAATAACAGGTCCACTTCCATTGCGGAAAGTGAATTAGGTTTATTGAGGCAAAAACAGACTGTATCAGGTCTAAGGGAAGGATTCTTTTCCAGAAAGGACAATACTGGTTGCAGTCAAGCAACAAGCAACGTTTCCGATGCCTCATCTGACACTGATGGTGATGTTAATGCAATTGAACATGCTGGAGCCAGCAGTTCACAAACAGTCCCATCTGTACATGCTAAAAAGTCGGAGTCTAATAACGATGGAAGTGATGGAATTGGCATATCTGGCAGGGAAAACTGTTTTCAACAATCTACTTATGAGAATCTAGACTGTCAAGATTCTGGTGCTTATGCTAATGAAATTGATCAGGCATTGGCTTCAAGTGTTGAGGTTGAAGGCAGCGATAGCATTGGACAAAATGTTGTTATGGATACTGAAGATGCTTCTAGTGGCCTCACCCAACAAAGGTTGCAAATTGAAGGTAGAGATAGCAATATGCAGGTAAATGAGGTACATATTGAGCAATCTGAGCTGGGTGGTATAACCGATAATGAAAGCTACTTATCACATCACAGCAATAGTATAGAGGGCAATATTGCTGCTGATGTGGATTGGGATGTATCTGTTGCTCCAGAAGTAGAGCAACCAGAAGAGGCTATTTCTGAAAATGAAGGAAGTGACTGGCATCAAACTAGCATTGAATGGAGTAGCACTGAGGATGGTGTTGACAATAATCAACTCGGTGGCTCATCAAATGAACTACCTCCAAACACATTCGGAAATGAAGATGGAGAAAATTCTCGCCTACAGGAAGGGCCTGAAGTGTGGCAGGAGGACAGCGGCTTTCAAGAGGCTGTAGAAATTTGGTTGGGAGGACCTTCTGATCATGAAGCAGCTCCAGTTGGTAGAATTCATGGATTTTATTTTCCCGAAGATGACAATGTGTACAGTGTCGAACTCAGGGAACTGCTAAGTAGGAGAAGTGTCTCAAACCTCCTTCGCAGCAGTTTTCGTGAAAGCCTTGATCAGTTGATACAATCATACGTTGAAAGGCAGAGTCATGCTAACGTTGAGTGGGAGCTGCAAGAAACAACCACCCCTTTCTCTCCCTCGGCAGCACAGGAGCTTGAGCAACAGAACAGGGATCCGATTGTTGGTACTCAGGATGCTGTTAATAGCTCACTTGGTCGTCAACCCTTGCCGCCGCCACCTCCGCCACCGCCGATATGGGATCACCGCCGCTCACGTCATGACAGATGGTCACCTCATGATATAAATAATCAACGCCTAGGAATGGAATGGGATGTCATTAATGACTTGAGAGTTGACATGGTTAGGCTACAGCAAAGAATGAACAATATGCAGAGAATGCTGGAGACCTGCATGGATATGCAGCTTGAGTTGCAACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCAACTGGTTCATCAGGAACACGTGACCATGATTCACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTGCATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGACATATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAAGTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCCATACTATAG 2487 0.4596 MAIAGVHSVAVIDSTLLRESHSQLSGRRGDGGGRGGARSSSLLQMWREIEDEHMAGQVQGRSGELLIRQRSDGLISDLSQDDASRRGEGEGHMIEDAISGENESETWSQSQSQNDSRDDEHEGLGNSNCXGDHRASNVPRGSGGSRRQWLGETEQERVSIIREWVQMSSQQRVVSSSENREDQSSEIGNQIERVRDGFVVNQHEGQSEHTRRGIRRLRGRQVLLDMLKKAEVERQREVQELFEHRAVSRFPHRNRIQALLRGRFLRNDRSTDNNRSTSIAESELGLLRQKQTVSGLREGFFSRKDNTGCSQATSNVSDASSDTDGDVNAIEHAGASSSQTVPSVHAKKSESNNDGSDGIGISGRENCFQQSTYENLDCQDSGAYANEIDQALASSVEVEGSDSIGQNVVMDTEDASSGLTQQRLQIEGRDSNMQVNEVHIEQSELGGITDNESYLSHHSNSIEGNIAADVDWDVSVAPEVEQPEEAISENEGSDWHQTSIEWSSTEDGVDNNQLGGSSNELPPNTFGNEDGENSRLQEGPEVWQEDSGFQEAVEIWLGGPSDHEAAPVGRIHGFYFPEDDNVYSVELRELLSRRSVSNLLRSSFRESLDQLIQSYVERQSHANVEWELQETTTPFSPSAAQELEQQNRDPIVGTQDAVNSSLGRQPLPPPPPPPPIWDHRRSRHDRWSPHDINNQRLGMEWDVINDLRVDMVRLQQRMNNMQRMLETCMDMQLELQRSIRQEVSAALNRSTGSSGTRDHDSPDDKSKWECVRKGVCCICCESNIDSLLYRCGHMCTCSNCANDLHRSGRKCPMCQAPVVEVIRAYSIL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01397 828 Coils Coil 704 731 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 475 548 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 173 192 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 307 324 - -
Adu08g01397 828 PANTHER PROTEIN, PUTATIVE-RELATED 1 827 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 79 99 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 745 764 - -
Adu08g01397 828 CDD mRING-HC-C3HC5_NEU1 776 814 - -
Adu08g01397 828 SUPERFAMILY RING/U-box 775 821 - -
Adu08g01397 828 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 827 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 630 662 - -
Adu08g01397 828 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 753 826 IPR013083 -
Adu08g01397 828 MobiDBLite consensus disorder prediction 22 45 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 77 151 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 332 364 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 492 532 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 630 683 - -
Adu08g01397 828 MobiDBLite consensus disorder prediction 307 364 - -
Adu08g01397 828 ProSiteProfiles Zinc finger RING-type profile. 776 815 IPR001841 -
Adu08g01397 828 Pfam Zinc finger, C3HC4 type (RING finger) 774 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01397 Adu-Chr8 23654442 23658679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01397 776 822 C3H Transcription Factor Family AT3G06140 38.298 1.22e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01397 - - vun:114184870 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01397 08 23654442 23658679 Adu08g01397 08 23654442 23658679 ECH
Adu08g01397 08 23654442 23658679 Adu03g00074 03 677710 682700 PCT