Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01383 ATGGACGGTGGCAGACACTACAACCGTGGCACCGTTGAGGAAGTTTTGCTCGACTTCAAGGGTCACAGAGCTGCTATGATCAAAGCCCTCACCATTGATGTTGAGGAGTGTTGCCGGCAGTGTGATCCATATAAGGAGAACCTCTGTCTGTGTATGGATACCCCACTGAACAGTGGGAAGTTAATTTACCCGCTGAAGAAATTCGAGCATATTTTCATCACCGTGTTTAAGTCAAGCCGACATATAACTCTCCAGGTTAAGCAATACACTGCTAGGAGGAACCGCTATAATTCGGCTATCTCCACACTAACAGAACAAAATTTGAGACCACTGCAAACTATGAATTTTGGAATGACCTG 359 0.454 MDGGRHYNRGTVEEVLLDFKGHRAAMIKALTIDVEECCRQCDPYKENLCLCMDTPLNSGKLIYPLKKFEHIFITVFKSSRHITLQVKQYTARRNRYNSAISTLTEQNLRPLQTMNFGMT 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01383 119 Coils Coil 86 106 - -
Adu08g01383 119 Pfam Alfin 11 51 IPR021998 GO:0006355|GO:0042393
Adu08g01383 119 PANTHER CPG BINDING PROTEIN 3 51 IPR045104 GO:0006355|GO:0042393
Adu08g01383 119 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3 3 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01383 Adu-Chr8 23487534 23488145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01383 1 50 Alfin-like Transcription Factor Family AT5G20510 62.745 6.37e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01383 - - twl:120004990 76.6405