Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01375 ATGCAGAGATCAGGCTTCGGCTCCGATGGAGTATACAGGTCACTCAGACCTTCACTCCATCTACCAAACAACCCAAACCTCTCTCTCGCCACCCACCTCTTCTCCAACGTCTCTTCCTTCCCCACTAAACCCGCTCTCTTCGACGCCGACACCTCCCAATCCCTCACCTTCGAGGAGATGAACTCCCTCGCCGTTAGAGCCTCCCACGCCCTCCAACGCCTCGGAATATCCAAAAACGACGTCGTTCTCTTCCTCTCCCCAAACACCATTTACTACCCCGTCTGCTTCCTCGCGGTCACCGCCCTCGGCGCCATCGCCTCCACCGTCAACCCCTCCTACACCGCCTCCGAAGTCTCCAAACAACTCAAAGACTGCAACCCCAAACTCATCTTAACCGTGCCGGACCAATGGGATAAAGTGAAGACCTTCAATCTCCCCGCAGTTTTCCTCGATTCGGATCCCACCGTCCACGTGTCACCATCGCAACGGGCCCCCAAGATCATGAGCTTCCACGATTTCGTGAAACTCGCCGGCACTGAAACAGAGTTCCCGAAGAGCAGCGTGAAGCAGAACGACACGGCGGCGCTGCTGTACTCGTCGGGAACAACGGGGTTGAGCAAGGGCGTGGTTCTGACACACCGGAACTTCATCGCGGCGGCGAAGATGGCGTGCATGGACGACGAGATGGCGGGGCAGATGCACGACGTGTTCCTATGCGTGCTTCCAATGTTCCACGTGTTCGGGCTGGCGTTGATACTGTACTCGCAGCTGCAGCGTGGGAACGCGGTTGTGTGCTTGAAGAGATTCGAGTTGAATGCGTTGTTGAGAAGCATCGAAAAGTACAAGGTCACCCACTTGTGGGTAGTGCCTCCCATCGTTCTTGCTCTTGCCAAACACGCCCTTGTTGACAAGTTTGACCTCTCGTCGTTGCGCCACATCGGTTCCGGCGCTGCTCCTCTCGGCAAAGAACTCATGCACGTCTGTTCCAAACGTTTCCCTCGCGCTATCGTCATGCAGGGGTATGGTATGACGGAGACTTGTGGGATTGTTTCCATGGAGAATGCGACGCGAGGGACGAGGAATAGTGGGTCAACCGGAATGCTAGCTCCGGGACTGGAAGCTCAAATAGTTAGCGTGGACTCGCTGAAGCCACAACCACCTTCAAAGATTGGCGAGATTTGGGTTCGTGGTCCTAACATGATGCAAGGTTATCATAACAATCCACGGGCCACAGAATTGACCATAGATAAACAAGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAAGAGGGGCATCTTTTTGTTGTTGATCGCATCAAAGAACTGATCAAGTATAAAGGTTTTCAGGTTGCGCCAGCAGAGCTAGAAGGCCTTCTTGTTTCTCACCCTCAAATACTTGATGCTGTTGTCATCCCTTATCCTGATGCTGAGGCTGGTGAGGTTCCTGTTGCCTATGTTGTTCGATCATCCAACAGTTCACTCACTGAAGAAGATATCATCAACTTTGTTGCTGATCAGGTTGCACCTTTCAAACGATTGAAAAGGGTTACATTCATCAATTCTGTTCCTAAGACAGCATCAGGAAAAATTCTCAGAAGAGAGCTTATAGATAAAGCAAGATCCAAAATATAA 1638 0.5183 MQRSGFGSDGVYRSLRPSLHLPNNPNLSLATHLFSNVSSFPTKPALFDADTSQSLTFEEMNSLAVRASHALQRLGISKNDVVLFLSPNTIYYPVCFLAVTALGAIASTVNPSYTASEVSKQLKDCNPKLILTVPDQWDKVKTFNLPAVFLDSDPTVHVSPSQRAPKIMSFHDFVKLAGTETEFPKSSVKQNDTAALLYSSGTTGLSKGVVLTHRNFIAAAKMACMDDEMAGQMHDVFLCVLPMFHVFGLALILYSQLQRGNAVVCLKRFELNALLRSIEKYKVTHLWVVPPIVLALAKHALVDKFDLSSLRHIGSGAAPLGKELMHVCSKRFPRAIVMQGYGMTETCGIVSMENATRGTRNSGSTGMLAPGLEAQIVSVDSLKPQPPSKIGEIWVRGPNMMQGYHNNPRATELTIDKQGWVHTGDLGYFDEEGHLFVVDRIKELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRSSNSSLTEEDIINFVADQVAPFKRLKRVTFINSVPKTASGKILRRELIDKARSKI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01375 545 Gene3D - 443 544 IPR045851 -
Adu08g01375 545 Gene3D - 9 442 IPR042099 -
Adu08g01375 545 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 544 - -
Adu08g01375 545 Pfam AMP-binding enzyme 36 447 IPR000873 -
Adu08g01375 545 ProSitePatterns EF-hand calcium-binding domain. 48 60 IPR018247 -
Adu08g01375 545 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Adu08g01375 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 544 - -
Adu08g01375 545 CDD 4CL 21 537 - -
Adu08g01375 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Adu08g01375 545 Coils Coil 538 545 - -
Adu08g01375 545 SUPERFAMILY Acetyl-CoA synthetase-like 21 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01375 Adu-Chr8 23347752 23350899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01375 1 545 Monolignol Biosynthesis Gene Families AT4G05160 64.587 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01375 K01904 - gmx:100797843 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01375 08 23347752 23350899 Adu08g01375 08 23347752 23350899 ECH
Adu08g01375 08 23347752 23350899 Adu03g00106 03 991675 995029 PCT