Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01367 ATGACTTCAATGAAGAATGAGAATGAGAGCAGTGTTCCATATTCTTCTTCTCCTTTGTCTGCCCAAAACCAAAGACCCATGGAAATTGCACCCATGGCAGCAGCCAACAACAACGCAATCAGCACCGCCATGTCCAGCAGACGCAGGAAGGACCGCCACATCAAGGTGGAAGGCCGAGACCGCCGTGTCCGCCTGTCCATCGCATGCGCCGCCTTTGTCTTCCAACTCACTCGCGAGCTCAACAACAAGAGCGACGGCGAGACTATTGAGTGGCTCCTCCGCCAAGCAGAGCCCTCCATTATCGCCGCCACCGGCCACGGTGTTCCACCCATCATCGGTAACCCCCCAGCCCCAGCGGCACCAGGAGATAACCCCATTCCCATTTCTCATTCAGTTCCGGTTTCTGCTTCTGCCTCTGCCTCTGCTTCTACTGCAGTTGCACCACCACCAAGCGAGGAAAACGAGTTTGTCGATGAGGGTGCAATAGATGAGCCATGTTTTTCAACCTTGGATGATTTTGATTTGCTTGGCAACCCTATCGACTGGGATTTCAATTTGATGTAA 564 0.5319 MTSMKNENESSVPYSSSPLSAQNQRPMEIAPMAAANNNAISTAMSSRRRKDRHIKVEGRDRRVRLSIACAAFVFQLTRELNNKSDGETIEWLLRQAEPSIIAATGHGVPPIIGNPPAPAAPGDNPIPISHSVPVSASASASASTAVAPPPSEENEFVDEGAIDEPCFSTLDDFDLLGNPIDWDFNLM 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01367 187 MobiDBLite consensus disorder prediction 1 24 - -
Adu08g01367 187 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 23 117 - -
Adu08g01367 187 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g01367 187 Pfam TCP family transcription factor 48 118 IPR017887 -
Adu08g01367 187 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 117 IPR005333 GO:0003700
Adu08g01367 187 MobiDBLite consensus disorder prediction 114 133 - -
Adu08g01367 187 ProSiteProfiles TCP domain profile. 49 103 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01367 Adu-Chr8 23175939 23176502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01367 50 110 TCP Transcription Factor Family AT5G23280 77.049 1.23e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu08g01367 TCP 1.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01367 - K16221 aip:107610427 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01367 08 23175939 23176502 Adu03g00122 03 1137398 1137814 PCT