Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01362 ATGAGTGGTTTAAGGCCTGATCATCAGTCTCCTCATCATGTAGCACAGCAAATTCGGCGTGATAAATTGAGAGTCCAGAACATTTCTCACCATCCACAATCACAGGATTTCCCCAACAATTTGGAACAATTCAACTTGGATCTTCTTCAAGTAAGGAATGTTAGAAATGCACACAACATGCTTGATGATGAGCCTCACCCACCACCACCAGGTGTTTATTCATCACAAGTGTCCAATTTCTTATCAACGCCTTTGAACCCTTTGGAGTATCACGAACTAGCTACTGTTGCAGCAGCTGAACAACCTAGTAGTAGTTGCAGTAGGGTAATGATGCATCAAAGTGAACTGCGCAGTTTGGGGAATTGGAGAAGCAGTGCTAACAGTAATCAAGGGTGTGATTGGTTTGTAAATTATGCATCAGGAAGCAGTTCTATGGCTAATAATGAAAGCAATAATCCCAACACTACTACTCATTTGGCTACTGAGATGAATAATGTGTCTTATAACCAGCACTATGAGAAGCCTAGTTGTTACAATGAATTCACAGATGTAATTGCTAATAGAGAAATTCAGAAGCAATTGGGAGGAGGAGTACTTCATCATCCTTCTTCTTCATCATCGTTGTCGCCTTTTTATCAGAATACTTTGCAGGATATTGTCAAGTCCGCTTCTATAAGTGCGCAAGGATCAGACAACATGGCCTTATTGATGCAGCAACCTGGCCATGGAATTTGGGTTGGAGATGGTAGTGGACTTGACCTTCATCCAAGCTATGGAAACCAACCGAATCAATTTCGTTGCGCCGGTGGTAATCCTTGGACGAATCGAACAGTTGACAACGCCCTTCGATGGAATAGTAGTCCACTTGGTTTCATAGACAAGAAGGATGATGAACACTCTGGACGACCTCTAATGAGCAATTCGAATCCTCAGAGCTTGTCTTTATCACTGTCATCAAATTCACAATCAAAGACTTCTGTGTCTCAATTTGAGCAAGTGTCTGCATCTGATGATCTTCAATGTAAGGATCCTCAGTACATGAAGTATGTAAGAGCTTTCATGAAGCCATCTATAGTTTCAAGAGATTCTGGGAAATCACCTCAAGATCCAGTGGGGGTGCCTTCAAGCACTAGCTATAGGAATGTAGGTCCCCTTGGCCCTTTCACTGGTTATGCTACTATTCTCAAGAGCTCAAGGTTCTTGAAATCAGCACAACAGTTATTGGATGAGTTCTGCCGTATATCTAGTCCAAGATTTTCAAAATCACGTGATGTCACACAAAGGTTATCTGGAGAAGCTAGTGCTTCTACTTCTACTGATGTTATCACTGTCGATAATCAAACTGAGGCTGCAGCAAAAGAAGGTAGCAATTCAGGTTCTTCATCTTCTATGTTCCATGGTGCAAATGAGAATAAAGCAGATTGGGGAACCGGGAGTGGTTCTTGTCTATCTCCTCGGCCAGATTACCAACAAAAGAAGGCAAGGCTCCTTTTCATGCAAGAGGAGGTTACAAGGAGATACAGGCAGTACCATCAACAAATGCAGATGGTTGTTTCATCCTTTGAGTCAGTAGCAGGTCTTAGTTCCGCCACTCCTTACATCTCCTTGGCTCTTAAGTCGGTATCGAGGCACTTCAAGTGCCTCAAAAATTCCATCTCAGATCAGCTCAAACATATAAGTGAAGTGTTGGGAGAGGATTTCTCAGTACCAAGAACCAGTACTTGTGGTAAAGATGACACCACTAGCATGGGAAGATTAAGTTGCATGGACCAAAGCTTTCAAAAGAACAAATCTGGGAGGGGTGGCACTGGCCTTGTTGAACCCCAGCAACATGTCTGGAGGCCCCAAAGAGGCTTGCCGGAACATTCTGTGGCAATTCTCAAAGCATGGTTGTTTGAGCATTTTCTTCACCCTTACCCCACAGACACTGATAAACACATGTTGGCAACACAAACAGGTCTTTCGCGAAACCAGGTGTCGAATTGGTTCATAAATGCTCGAGTCCGAGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAAAGGCACAACAGGTGCCAACAAGAACAACAACAACAATCACCCTGGTACTGAAAATGAGAGAGCTTGTGTTAATGAAGATGGTTCCAGCAGCCAACAGCATAGAGTAATAGAGGGGACTCAAAGCAAGTTCGACATGCATTCTTTGATTCCTGAGAACCAACAGCAGTCTCATCAGTGTATGGAACTTGAAATGGAGTCAACAACCAATGAAGAACAATGGAGCCAAGAGAAGAGGTCTAAATTGGAATGTGAGATGAGTTCAACAAGCATGGATGAAGGGTCACTGATGATGGGTTTTATGCCATATAGCAGGCGTGATCATCAGGTTGGTGGGCTTGGATCTGTGTCACTAACATTGGGTCTAAGGCATGGTGTTGAAGCTGTTGTGCAAAACCAACAGCAGCAACAACAGTTACAAGAGGAGCAGCTTAGGCGTCACTTTGGAGGACACATGATCCATGATTTTGTGGGCTGA 2526 0.4343 MSGLRPDHQSPHHVAQQIRRDKLRVQNISHHPQSQDFPNNLEQFNLDLLQVRNVRNAHNMLDDEPHPPPPGVYSSQVSNFLSTPLNPLEYHELATVAAAEQPSSSCSRVMMHQSELRSLGNWRSSANSNQGCDWFVNYASGSSSMANNESNNPNTTTHLATEMNNVSYNQHYEKPSCYNEFTDVIANREIQKQLGGGVLHHPSSSSSLSPFYQNTLQDIVKSASISAQGSDNMALLMQQPGHGIWVGDGSGLDLHPSYGNQPNQFRCAGGNPWTNRTVDNALRWNSSPLGFIDKKDDEHSGRPLMSNSNPQSLSLSLSSNSQSKTSVSQFEQVSASDDLQCKDPQYMKYVRAFMKPSIVSRDSGKSPQDPVGVPSSTSYRNVGPLGPFTGYATILKSSRFLKSAQQLLDEFCRISSPRFSKSRDVTQRLSGEASASTSTDVITVDNQTEAAAKEGSNSGSSSSMFHGANENKADWGTGSGSCLSPRPDYQQKKARLLFMQEEVTRRYRQYHQQMQMVVSSFESVAGLSSATPYISLALKSVSRHFKCLKNSISDQLKHISEVLGEDFSVPRTSTCGKDDTTSMGRLSCMDQSFQKNKSGRGGTGLVEPQQHVWRPQRGLPEHSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGTTGANKNNNNNHPGTENERACVNEDGSSSQQHRVIEGTQSKFDMHSLIPENQQQSHQCMELEMESTTNEEQWSQEKRSKLECEMSSTSMDEGSLMMGFMPYSRRDHQVGGLGSVSLTLGLRHGVEAVVQNQQQQQQLQEEQLRRHFGGHMIHDFVG 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01362 841 MobiDBLite consensus disorder prediction 685 712 - -
Adu08g01362 841 SUPERFAMILY Homeodomain-like 614 680 IPR009057 -
Adu08g01362 841 MobiDBLite consensus disorder prediction 303 320 - -
Adu08g01362 841 MobiDBLite consensus disorder prediction 449 469 - -
Adu08g01362 841 Pfam Homeobox KN domain 630 669 IPR008422 GO:0003677|GO:0006355
Adu08g01362 841 Pfam Associated with HOX 394 553 IPR006563 -
Adu08g01362 841 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 66 809 - -
Adu08g01362 841 MobiDBLite consensus disorder prediction 359 378 - -
Adu08g01362 841 SMART prehox3 389 554 IPR006563 -
Adu08g01362 841 MobiDBLite consensus disorder prediction 293 320 - -
Adu08g01362 841 MobiDBLite consensus disorder prediction 361 378 - -
Adu08g01362 841 CDD homeodomain 613 674 IPR001356 GO:0003677
Adu08g01362 841 Gene3D - 616 678 - -
Adu08g01362 841 ProSiteProfiles 'Homeobox' domain profile. 610 673 IPR001356 GO:0003677
Adu08g01362 841 SMART HOX_1 613 677 IPR001356 GO:0003677
Adu08g01362 841 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 66 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01362 Adu-Chr8 23088949 23094866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01362 484 682 Homeobox Transcription Factor Family AT4G34610 54.774 5.34e-64 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Adu08g01362 POX 1.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01362 - - adu:107461750 1598.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01362 08 23088949 23094866 Adu08g01362 08 23088949 23094866 ECH
Adu08g01362 08 23088949 23094866 Adu03g00126 03 1167547 1172486 PCT