Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01360 ATGGCAAATAGTACATGTTCTAGCTCAAGTTCAATGAATTCAAAACAGAAGCCAATAAAAGAAAAGAGTGTGAAACAATTGACATTTGAAGCTAAGGAAGTCAATGACAATGAAGAGCACGATTTGGGAACTTCACACTTAGAAACAAAGAGAATGGATGCTCGTTGGTACCGGTCTCTGTTTCGAAAACCAAAAAATGGTAAGGTTGAGGTGCCTCAAAGGGTTCAACCTGATATCTTTAGAAACGAGACAGCACAAATGCCAGAGTCAAGGAATCCATTACTGGATGAAGATTTAGTTAGGAAGGATGTTGGGCATGATGGAGAAAAATCGACTCATTCTAAGAGAAATGGAATCATGTTGGACACGGGTTCAGATCTTTCTACCACATTGGCTGATGATGATGATTGCAACCTCATCCCTTCAAGGTTGCGTGACAATATTGTAGGGACTGGTGGGTCATGTTCCAAACGGAGAAGGTTGGATTGTGATCCTGTGGTCTCATCTAACCCTTCTACAACTGAGCTTCAGGATGGAGTTGATACTGATGCAAGTGTGTTGCAAAAGGAATATCCTGTAAATTCACCAAAAGAAGTCACAAAGCACACCTGTCTAATTTGCAAGAGTGGTGGACAGCTACTGTTTTGTGGTGGAAAAGGATGCAGCGGGTGCTACCATTCTTCTTGTCTTGAGCCACCCCTGGTCGATGCCTCCATTGGAGTTTGGTATTGCCATTTCTGTGTGAGGAAGAAGATTGAACTTGGTGTATATTCTGTATCGGAGGGAGTAGAATCAATTTGGGATGTCAAAGAAGTTTTGACATCAAATTCTGATGGGTCTACTCTTGCTCGGAAAGAATATCTAGTGAAATATAAAGGCGTTGCTCATGTTCATAATCGATGGATACCAGAAAATCAGTTACTTCGTGAAGCTCCTTCACTTCTTAAAAACTTTAATATGAAAAATCAGGACCGAAGGTTGAAGCTAGAATGGAGTCTACCTGATCGTCTGCTGCAGAAGAGAGCAATAATCCATTCCACACAGCAAGATGATCACAACATTAATGATGGAGTTCAAAACTTAAACTGTTGCTACGAATGGCTTGTGAAATGGCGTGGTCTTGGTTATGAGCATGCTACATGGGAGTTGGACAATGAGTTGTTTCTTCGTTCACCTGAAGGTCAGAGGTTAATCAGAGGCTATGAAGAGTGTTTCCAGAGAGCAAAGAGAGCAGCTTCTTGCTCCAGAGTAGATAATGTGCCACAGATTGATCAACTCAAGGAGCGGCCGTCAAGTCATATTGCATATAAGTGCAAGTCGGACTCTTTCAAGTTTATTGAGTATTGGGTTCCTGTCCAGATATCTCATGCGCAGCTTGAGCAGTATTGTGCTACTTTACATTCAAATGCTTCAATTCTTCGTTCATCAGCAAAGACGGATATCGATGCCCTTCGTGACATTATTATTACGGCCCGAAAGTGTTGTATTCATCCTTCTATTGTTGATCAAACACTGAAAAGTCGACTTACTGTTGGTCTTGATGAGGCTGAATTCATCGATGTTGATATAAAAGCAAGTGGCAAGCTGCAACTACTTGATTCGATGCTCATGGAGTTGAAGGCTAAAAGCTTAAGGGGTCTGATTCTTTTTAAGTCTATTGGTGGTTCTGGGAGGGTTTCTGCAGGAGATTTTTTGGATGACTTGTTACGGATAAGATTTGGTCCAAACTCGTATGAACGGGTTGACAAAGGTCTTTTAGTGTCCAAGCAGAAAGATGCCATGAGGAAATTTAACAACAAGGATGATGGACGGTTTGTTTTTCTGTTAGATGCATGTGCCTGCCGTCCAGGCATCAGATTATCATCACTGGATACTATTATTATATTTGACAGTGATTGGAACCCAACTAATGATATAAGATCCCTTCAGAAGATAACAATTGATTCACAGCCCCAAGTGATAAAAATATTCCGCTTATATTCAGCCTTCACTGTGGAAGAAAATGCCTTGATCCTTTCAAAGCAAGATAGGATACTTGACAGCAATTTACTGAACATAAGCAGGACTACCTGCCAAATGCTGTTGATGTGGGGAGCTGGTTCCCTATTTGATGATTTGAAAATTTTCCATCACAGTGAAACTTCTGTTTTGGGTCAGAAATCTTCATCTGGGCAACAACATCTGACAGAAACAGTCCGTGAATTATCATCAGTACTATCTCAGGACGTTGAAACAAGAAACTGTTCAGTTTTATTAAAAGTCAGGCAAAATGGGTCAACATACCGGGCAGATTTTCCTTTGCCTGGTGAGATGAAAAATAAGATACTGGAGGAAGAGCTTCCCCATATTTTTTGGACAAAACTTTTTGAGGGGAAACAGTTTAAGTGGAAGTACTCTTGTAGTTCATCTCAGCGGAGCCGAAAGAGAGTAGATCTTTTTGATGGTAGTGGAGGTATATCAAAAAAGCGCCGGAAAGTGAAAAGCAATCTTATGGACCAGCCTTCTTCAAAATCTGAAGGTTTTAAGTTATCTACTGGGATCAAGACAGATAGACTTGGATTTGATGATGTCGAACATGAGGAAACAACTAGACTGCGTGATGAGCAGAGGAGCTTATATCTTTCTCTGAAGCCAGAGATCAAAAAGCTTTGTGGTGTTCTTCTTCTCCCTATTTGGACTGTTGCTCCATTGCTAAAGCACAAAGTTGACCACAGGGATTCTCTTTTACTTGCAAAACAGCATTTGGATTTTGTCTGTAGGAAAGAAGAGGTGGATTATATCTACTCAGTTTTACGCTGTCTGAAGGGACTTTTTTTACATCGGATGGGAAATTCAAAGGATACTGGTTCTCCAAAATCTCCCGAGTCATCAAGGAAGGTTTATTCCAATAAAGAAGTAGCACAAGAGGTTGACTTGTTTAAAAATGATGTGTTCAGAAGTATTAGGGAAATACGGAAGAAGTGCCAAGAGCAGTTGAAGAAACTTAAACGGCTGCAACAAGAAGAGAAGGAAAGATTAGAAACAGCTTTTGAGGATGAAAAGGCTGAATTTGAGAAAAAGTACAAAATAGAGTCATTGGTTATTCGGACCTGCTCTCCAAATGATGTGATGAAGACAGAGAAGCTCAAAGTCTTGAACACTGAATTTGGTTCAAAAATTGAAGAACTAAAATGTGAGCATGAAACACGTCTAAAGGCTCTTGAGGACACACATATGGCTGCTAGGCAGAACTTCAAACATAGAGAAGATGCATGGGCACAAGATGTAGAGGATTGGGCAAAAAGTGAATTGTCAAACATAGATGCTTCAAAGGAACTTGGGACGGCAGTTGAATACACGCAGCTGTCTGATCAGGAAAATGCTCACAAGGGTTCAGAGAGTATGCCCCTTGTGTCTGATCATTTGACTGATGAGAAGGGTCATGATAATAACACAAATGAGGCCATGCCTAATGATGTTCAGGATGAAGTTCATTCTTCTACACACAATAAACTAGATGGGACTGTTTCAAGCCTGTCTTGTGAGAATGCCGTGCAAACTCATGGAGCTTATAATGGTTTGGATAATGCTACCACTGAAACTTCACATTTACCTAATGAAGGGATTGCTGATGGGGCCATGGCAGGCATAGTGAATAGAGATGCACCCAGAAAGCCTACCACCGTCACTGCTACTGATTGTCTGGAAAATGTTTCAGCTGATAGTCCTCCTCCATCTGTGGAGCAAGTAACTGATGGAGTTGCTTTAAATGAAATTTTAGATAGATGTGCCACCCCAGAAACTAGCCACGATCAGGGCAGAGTAAGCATATTGGGACGAGAGGTACCTGTGGAAGTGGAAACACATAGGATGGTCAATTTTAGTGAATGTCCCGTAAATGCTGCTGCTGTCAATCATTTCTCATCTGTGGATCAAACATCTGACAAAGGACCTATAAATGACCCAGATAGTACTGTCTCATCATTCAGGTGTTGTCAAGCTGATGGTCCTGATAAAAGTTCCCTTTCAAATCCACCTTTGGTACAACAATTTACTGATGTAGTCTCTTTGAATGAACCTGATGGAGATACTCATGAAGCGGCTGATTGTCATAATGATACAAGGCCTTCCACAGACACTTCTTCAGTGGATAAAAGTAGTATGATACCAGCCCAGCTGGAAGGAGTGCAGCAATCACCATCTCTGGAGGCCCCTCCTGCTCAGGATACTGCTGGAGAAGTGCAGAATTCTTCTGAAAGAGCTGAACTAGTACCTAATCTAGTTGGTGTTGTTCCAGCTAATCAATCAAATTCATGCATCCTGGAGCCTTCCGAGAATGGAGTTGAACATCAGCCGAACAGAAATGATCTCCCCCACCACGAAACAGAGGTTTCAGCTGTGGTTCCTAATCAGGATGTTGTGCAGGCTGACTCAAATTTAGAGCTTGGTTCACACTCGCAAGCAGTTGTGCACTCTGTCCTAAATTCAGGCCATGATTCACTTGGGCCAGTTGGAGTCATAAGAGAGGCTTCAAGTTCAAGCTTGAGAAATTTGTCAACTCCTTCAGAAATCAACAATCATCCTATACATACTGCAACTCATTCAGCTTCTAGAATGCCTCTGCCGTTGAGCGCCGATCCACTTAAAAATGAATTGGAAAGAATAAAAAAAATTATTGAACAACTGACCAAAAACCATGAAGAAATGAGATCTAAACTGAAGTCTGATTTCGAAAAGGAATTGGAGGCACTTCGTAGGAAGTATGATATTAAATTTCAATTGGTTGAGAATGAATTTCAACAAACGAAGAACAGGTTGGATTCAAGTTACCACACAGTTTTGGTAAATAAGATGTTGGCAGATTTTTTTCGGTCCAAATGCATGTATCGTAAAACATCTGATGCATATGGAGTGCAGCAAGATGCAGGTGTTGCCCAGCAGTCGATTCAGCTTGCAAGACAACAAAGTGCTACTTTTCCTTCCCAGGTTGTTGCTGGTTCATCTTCCCGGGGACCACTTTCTGCCAATCTTCATAGTCCATCTGCTTTGGTTAGCTCTCAGAATTCGCTCCCACCTTCAAATGTTACTTACAAGACACCAAGTCCTCCTGCAAGACTTCCTCTTAACTGCAATTCTTCACCCTCAGGGAATTTTCCGATTGCCAGTGAGATGCGAGCCCCGGCACCACATCTCCAGCCTTTTAGACCCTCGACACCTATGCTGGCTCCTAATCACCCTGCTCTCCTTCATGGGATGCCAAATCAGGCTGCACCTATTAACATACCTGCGATTGCTCCCACATTGTCTTGTGTTCCAGCCCAACCAACTCCACTGACATATCAGTCTGATCCTCAGATGGCCCACCAGCCGAATAGCTCTGTTGGAACTGGTGGGTTTTCCACCCTTAACTTACGGACCATCAGCTTACATGCGAATGCCAACACTCAATCTACTGTTTGTCTTCCAAGAGTTCAGCCAAGTATGTCAGAAGTGGTTTCTTTGAACCCACCCAGAATTGGCACCAGTGTTAATGTGACTCCTAACTCATCCAGTCAAGCTGCATCTCTTGAATTAGTCTGTTTATCAGACGATGAGTGA 5577 0.4198 MANSTCSSSSSMNSKQKPIKEKSVKQLTFEAKEVNDNEEHDLGTSHLETKRMDARWYRSLFRKPKNGKVEVPQRVQPDIFRNETAQMPESRNPLLDEDLVRKDVGHDGEKSTHSKRNGIMLDTGSDLSTTLADDDDCNLIPSRLRDNIVGTGGSCSKRRRLDCDPVVSSNPSTTELQDGVDTDASVLQKEYPVNSPKEVTKHTCLICKSGGQLLFCGGKGCSGCYHSSCLEPPLVDASIGVWYCHFCVRKKIELGVYSVSEGVESIWDVKEVLTSNSDGSTLARKEYLVKYKGVAHVHNRWIPENQLLREAPSLLKNFNMKNQDRRLKLEWSLPDRLLQKRAIIHSTQQDDHNINDGVQNLNCCYEWLVKWRGLGYEHATWELDNELFLRSPEGQRLIRGYEECFQRAKRAASCSRVDNVPQIDQLKERPSSHIAYKCKSDSFKFIEYWVPVQISHAQLEQYCATLHSNASILRSSAKTDIDALRDIIITARKCCIHPSIVDQTLKSRLTVGLDEAEFIDVDIKASGKLQLLDSMLMELKAKSLRGLILFKSIGGSGRVSAGDFLDDLLRIRFGPNSYERVDKGLLVSKQKDAMRKFNNKDDGRFVFLLDACACRPGIRLSSLDTIIIFDSDWNPTNDIRSLQKITIDSQPQVIKIFRLYSAFTVEENALILSKQDRILDSNLLNISRTTCQMLLMWGAGSLFDDLKIFHHSETSVLGQKSSSGQQHLTETVRELSSVLSQDVETRNCSVLLKVRQNGSTYRADFPLPGEMKNKILEEELPHIFWTKLFEGKQFKWKYSCSSSQRSRKRVDLFDGSGGISKKRRKVKSNLMDQPSSKSEGFKLSTGIKTDRLGFDDVEHEETTRLRDEQRSLYLSLKPEIKKLCGVLLLPIWTVAPLLKHKVDHRDSLLLAKQHLDFVCRKEEVDYIYSVLRCLKGLFLHRMGNSKDTGSPKSPESSRKVYSNKEVAQEVDLFKNDVFRSIREIRKKCQEQLKKLKRLQQEEKERLETAFEDEKAEFEKKYKIESLVIRTCSPNDVMKTEKLKVLNTEFGSKIEELKCEHETRLKALEDTHMAARQNFKHREDAWAQDVEDWAKSELSNIDASKELGTAVEYTQLSDQENAHKGSESMPLVSDHLTDEKGHDNNTNEAMPNDVQDEVHSSTHNKLDGTVSSLSCENAVQTHGAYNGLDNATTETSHLPNEGIADGAMAGIVNRDAPRKPTTVTATDCLENVSADSPPPSVEQVTDGVALNEILDRCATPETSHDQGRVSILGREVPVEVETHRMVNFSECPVNAAAVNHFSSVDQTSDKGPINDPDSTVSSFRCCQADGPDKSSLSNPPLVQQFTDVVSLNEPDGDTHEAADCHNDTRPSTDTSSVDKSSMIPAQLEGVQQSPSLEAPPAQDTAGEVQNSSERAELVPNLVGVVPANQSNSCILEPSENGVEHQPNRNDLPHHETEVSAVVPNQDVVQADSNLELGSHSQAVVHSVLNSGHDSLGPVGVIREASSSSLRNLSTPSEINNHPIHTATHSASRMPLPLSADPLKNELERIKKIIEQLTKNHEEMRSKLKSDFEKELEALRRKYDIKFQLVENEFQQTKNRLDSSYHTVLVNKMLADFFRSKCMYRKTSDAYGVQQDAGVAQQSIQLARQQSATFPSQVVAGSSSRGPLSANLHSPSALVSSQNSLPPSNVTYKTPSPPARLPLNCNSSPSGNFPIASEMRAPAPHLQPFRPSTPMLAPNHPALLHGMPNQAAPINIPAIAPTLSCVPAQPTPLTYQSDPQMAHQPNSSVGTGGFSTLNLRTISLHANANTQSTVCLPRVQPSMSEVVSLNPPRIGTSVNVTPNSSSQAASLELVCLSDDE 1858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01360 1858 Pfam Chromo (CHRromatin Organisation MOdifier) domain 351 387 IPR023780 -
Adu08g01360 1858 Pfam Chromo (CHRromatin Organisation MOdifier) domain 267 319 IPR023780 -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1303 1324 - -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1303 1378 - -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1330 1350 - -
Adu08g01360 1858 ProSitePatterns Zinc finger PHD-type signature. 204 247 IPR019786 -
Adu08g01360 1858 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 421 1819 - -
Adu08g01360 1858 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 421 1819 - -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1352 1366 - -
Adu08g01360 1858 Gene3D - 420 445 IPR038718 -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1 23 - -
Adu08g01360 1858 CDD SF2_C_SNF 526 639 - -
Adu08g01360 1858 Gene3D - 446 680 IPR027417 -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 103 122 - -
Adu08g01360 1858 SUPERFAMILY Chromo domain-like 220 325 IPR016197 -
Adu08g01360 1858 SMART PHD_3 203 248 IPR001965 -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1118 1168 - -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1 17 - -
Adu08g01360 1858 Gene3D - 255 328 - -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1390 1411 - -
Adu08g01360 1858 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 531 695 IPR001650 -
Adu08g01360 1858 SUPERFAMILY FYVE/PHD zinc finger 192 251 IPR011011 -
Adu08g01360 1858 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 7 407 - -
Adu08g01360 1858 Gene3D - 333 401 - -
Adu08g01360 1858 SMART chromo_7 330 406 IPR000953 -
Adu08g01360 1858 SMART chromo_7 260 323 IPR000953 -
Adu08g01360 1858 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 7 407 - -
Adu08g01360 1858 ProSiteProfiles Chromo and chromo shadow domain profile. 338 403 IPR000953 -
Adu08g01360 1858 Gene3D - 1538 1619 - -
Adu08g01360 1858 Coils Coil 1538 1572 - -
Adu08g01360 1858 SUPERFAMILY Chromo domain-like 364 403 IPR016197 -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1655 1693 - -
Adu08g01360 1858 MobiDBLite consensus disorder prediction 1655 1688 - -
Adu08g01360 1858 Coils Coil 978 1016 - -
Adu08g01360 1858 ProSiteProfiles Chromo and chromo shadow domain profile. 267 330 IPR000953 -
Adu08g01360 1858 ProSiteProfiles Zinc finger PHD-type profile. 201 250 IPR019787 -
Adu08g01360 1858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 254 IPR013083 -
Adu08g01360 1858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 685 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01360 Adu-Chr8 23040017 23052380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01360 204 371 Core DNA Replication Machinery Family AT4G14700 28.000 1.92e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01360 - K11642 aip:107610432 3546.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01360 08 23040017 23052380 Adu08g01360 08 23040017 23052380 ECH
Adu08g01360 08 23040017 23052380 Adu03g00131 03 1240224 1248972 PCT