Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01359 ATGGAGAGCATGCGGAGAGGGATAGACTGTTACGGCGTCACAACTGGCTTTGGTGCAACCTCACACCGGAGAACTACCCAAGCTGTTGCCCTTCAAACTGAGCTCATTAGGTTTCTGAATGCTGGAATATTTGGGAATGGCAAAGAATCATGTCATACTCTGCCACAAAGTGCAACAAGGGCTGCAATGCTTGTTCGAATCAACACACTCCTTCAAGGCTACTCTGGCATTAGATATGAGATTCTAGAAGCCATTGCAAAGCTCCTCAACAATAACATCACACCAGTAGTGCCATTGCGTGGCTCAATTTCCGCCTCCGGAGACTTGGTTCCGTTTTCATACATAGCAGGACTACTCACAGGAAGGCCTAATTCGAAGGCCTTCGGTCCAAATGGCGATACACTCACGGCCGAACAAGCCTTCAATCTAGCCGGCATTGGTAGCGAATTCTTCGAGTTGCAGCCTAAGGAGGGTCTTGCACTTGTCAATGGAACTGGTGTTGGTGCTGGTTTGGCTTCAATAGTCTTATTTGAGGCCAACATCTTAACCATCTTATCCGAAATCATGTCTGCGATTTTCGCAGAAGTGATGCAGGGTAGGCCAGAGTTTACAGATCATTTGACTCACAAATTGAAGCATCACCCTGGTCAGATTGAAGCAGCAGCACTCATGGAACATATCTTGAATGGAAGTGCTTATGTTAAATCAGCACAGAAATTGCATGACATTGAGCCTTTTCAAAAGCCAAAGCAAGATAGATATGCTCTTAGGACTTCGCCGCAGTGGTTAGGACCACAAATTGAAGTGATTCGTTTGTCAACCAAGTCCATTGAAAGAGAGATCAACTCTGTGAATGACAATCCCTTGATCGATGTTTCAAGGAACAAGGCTTTGCATGGTGGCAATTTTCAAGGTACACCGGTTGGTGTTTCAATGGACAATACAAGGTTAGCACTGGCTGCAATTGGAAAACTCATCTTTGCACAAATGTCTGAGTTGGTCAATGAGTTCTATAACAATGGTTTACCTTCAAATCTCTCTGGGGGGCAATGTCCTAGCTTGGATTATGGATTCAAGGGTGCTGAGATAGCCATGGCTGCATATTGTTCTGAGCTTCAGTATCTGGCAAACCCAGTGACAAATCATGTGCAAAGTGCGGAACAACACAACCAGGATGTGAATTCATTGGGGCTGATCTCAGCTAGGAAAACAGCTGAAGCTGTTGAGATATTAAAGCTCATGTTTTCAACCTACTTGGTTGCTCTATGTCAGGCTATAGATTTGAGGCATTTGGAGGATAATATGAAGATCACAGTTAAGAACACAGTGAGCAGAGTAGCTAAGAAAGTCCTCAATCTAAGTGTCAATGGGGAGCTTCATCCTCATCCTTCAAAATCTTGTGAGAAAGATTTGCTCAAAGTGGTTGATTGCGAGCATGTCTTCACCTATATTGATGACCCCTGTAATCCTGCATACCCTTTGATGCAGAAACTGAGGCTAGTGCTTGTGGAACATGCATTGATGAGGAGTAGCAATGGCTTGAAAAGCACGAGCGCGACCATCTTTGCAAAGATTGGCGCTTTTGAGGAGGAACTCAAGAAGGTGCTGCCCAAAGAAGTTGAGGCTACAAGGGATGCTTTTGAGGAAGGGAATGCAGTAACTCCTAACAAAATTAAGCAGTGCAGATCCTATCCAATCTACAAGTTTGTGAGGGAGGAACTGGGAACAGAGTTTCTAACTGGAGAGAAGATTAAATCCCCTGGTGAAGATTTTGATAAAGTTTTCAATGCAATTAACCAGGGTAAGATAATAGACCCAATCTTTGAATGTCTCAAGGACTGGGATTGCACTCCTCTTCCCATATGTTGGAGCTCCTGA 1878 0.443 MESMRRGIDCYGVTTGFGATSHRRTTQAVALQTELIRFLNAGIFGNGKESCHTLPQSATRAAMLVRINTLLQGYSGIRYEILEAIAKLLNNNITPVVPLRGSISASGDLVPFSYIAGLLTGRPNSKAFGPNGDTLTAEQAFNLAGIGSEFFELQPKEGLALVNGTGVGAGLASIVLFEANILTILSEIMSAIFAEVMQGRPEFTDHLTHKLKHHPGQIEAAALMEHILNGSAYVKSAQKLHDIEPFQKPKQDRYALRTSPQWLGPQIEVIRLSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLIFAQMSELVNEFYNNGLPSNLSGGQCPSLDYGFKGAEIAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMFSTYLVALCQAIDLRHLEDNMKITVKNTVSRVAKKVLNLSVNGELHPHPSKSCEKDLLKVVDCEHVFTYIDDPCNPAYPLMQKLRLVLVEHALMRSSNGLKSTSATIFAKIGAFEEELKKVLPKEVEATRDAFEEGNAVTPNKIKQCRSYPIYKFVREELGTEFLTGEKIKSPGEDFDKVFNAINQGKIIDPIFECLKDWDCTPLPICWSS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01359 625 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 1 612 IPR005922 GO:0005737|GO:0006559|GO:0016841
Adu08g01359 625 Gene3D - 1 165 IPR024083 -
Adu08g01359 625 CDD PAL-HAL 1 429 IPR001106 -
Adu08g01359 625 SUPERFAMILY L-aspartase-like 2 622 IPR008948 GO:0003824
Adu08g01359 625 Gene3D - 432 556 IPR023144 -
Adu08g01359 625 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 1 622 - -
Adu08g01359 625 PANTHER HISTIDINE AMMONIA-LYASE 1 622 IPR001106 -
Adu08g01359 625 Pfam Aromatic amino acid lyase 3 433 IPR001106 -
Adu08g01359 625 Gene3D Fumarase/aspartase (Central domain) 167 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01359 Adu-Chr8 23036445 23039344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01359 1 622 Monolignol Biosynthesis Gene Families AT2G37040 77.170 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01359 K10775 - vvi:100241575 1011.52